Factsheet for Os12t0538600-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 3
plastid 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0923800-01
Os02t0510000-01
Os02t0708400-01
Os02t0828566-01
Os03t0401200-01
Os03t0422702-00
Os04t0388800-01
Os04t0654700-02
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	Os02t0708400-01	AT3G27960.1	21798944
AT4G15700.1	Os04t0654700-02	AT1G22920.1	21798944
AT4G15700.1	Os06t0207966-00	AT1G73360.1	21798944
AT4G15700.1	Os06t0208100-00	AT1G73360.1	21798944
AT4G15700.1	Os01t0923800-01	AT2G05230.1	21798944
AT4G15700.1	Os02t0510000-01	AT2G05230.1	21798944
AT4G15700.1	Os03t0401200-01	AT2G05230.1	21798944
AT4G15700.1	Os04t0388800-01	AT2G05230.1	21798944
AT4G15700.1	Os01t0923800-01	AT2G05250.1	21798944
AT4G15700.1	Os02t0510000-01	AT2G05250.1	21798944
AT4G15700.1	Os03t0401200-01	AT2G05250.1	21798944
AT4G15700.1	Os04t0388800-01	AT2G05250.1	21798944
AT4G15700.1	Os02t0828566-01	AT5G08330.1	21798944
AT4G15700.1	Os03t0422702-00	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G025680.1	Barley	cytosol	88.35	88.35
TraesCS5A01G094700.1	Wheat	cytosol	88.35	88.35
TraesCS5D01G107200.1	Wheat	cytosol	88.35	88.35
TraesCS5B01G100900.1	Wheat	cytosol	87.38	87.38
GSMUA_Achr5P00380_001	Banana	extracellular	76.7	76.7
GSMUA_Achr11P...	Banana	cytosol, extracellular	75.73	75.73
GSMUA_Achr11P...	Banana	cytosol	73.79	73.79
Os01t0368900-01	Rice	cytosol	73.79	73.79
GSMUA_Achr1P26720_001	Banana	cytosol	71.84	71.84
GSMUA_Achr5P00370_001	Banana	cytosol	69.9	69.9
GSMUA_Achr8P33660_001	Banana	cytosol	68.93	68.93
Os11t0655900-01	Rice	extracellular	69.9	66.67
Os12t0538700-01	Rice	cytosol	66.99	66.35
GSMUA_Achr7P03690_001	Banana	cytosol	66.02	66.02
GSMUA_AchrUn_...	Banana	cytosol, extracellular	66.02	66.02
VIT_05s0020g01750.t01	Wine grape	cytosol	66.02	66.02
KRH11237	Soybean	cytosol	65.05	65.69
KRH21036	Soybean	cytosol	65.05	65.69
KRG96386	Soybean	cytosol	64.08	65.35
KRH02215	Soybean	cytosol	63.11	63.73
KRH50911	Soybean	cytosol	63.11	63.73
VIT_05s0020g01760.t01	Wine grape	cytosol	63.11	63.73
KRH68125	Soybean	cytosol	62.14	63.37
Os11t0656400-00	Rice	cytosol, plastid	66.99	63.3
Os11t0656700-00	Rice	cytosol, plastid	66.99	63.3
Bra023688.1-P	Field mustard	cytosol	62.14	62.75
Os11t0656000-00	Rice	cytosol, plastid	66.02	62.39
AT4G15660.1	Thale cress	cytosol, extracellular	61.16	61.76
AT4G15700.1	Thale cress	cytosol	61.16	61.76
AT5G18600.1	Thale cress	cytosol	61.16	61.76
Bra006467.1-P	Field mustard	cytosol	61.16	61.76
Bra033503.1-P	Field mustard	cytosol	61.16	61.76
CDX70828	Canola	cytosol	61.16	61.76
CDX88929	Canola	cytosol	61.16	61.76
CDY02610	Canola	cytosol	61.16	61.76
CDY66333	Canola	cytosol	61.16	61.76
CDY68328	Canola	cytosol	61.16	61.76
Solyc01g067460.1.1	Tomato	cytosol	61.16	61.76
VIT_07s0104g01390.t01	Wine grape	plasma membrane	61.16	61.76
AT4G15670.1	Thale cress	cytosol	60.19	60.78
AT4G15680.1	Thale cress	cytosol	60.19	60.78
Bra002171.1-P	Field mustard	cytosol	60.19	60.78
CDX92597	Canola	cytosol	60.19	60.78
CDY13904	Canola	cytosol	60.19	60.78
PGSC0003DMT400058374	Potato	cytosol	60.19	60.78
Bra033504.1-P	Field mustard	cytosol	56.31	60.42
Bra033501.1-P	Field mustard	cytosol	59.22	59.8
KRH11238	Soybean	cytosol	59.22	59.8
KRH50912	Soybean	cytosol	59.22	59.8
PGSC0003DMT400058325	Potato	cytosol	59.22	59.8
Solyc01g067440.2.1	Tomato	cytosol	59.22	59.8
KRH71536	Soybean	extracellular	58.25	59.41
AT4G15690.1	Thale cress	cytosol	58.25	58.82
CDY66332	Canola	cytosol	58.25	58.82
KRH21035	Soybean	cytosol	58.25	58.82
KRH31919	Soybean	cytosol, plasma membrane	57.28	58.42
Bra012773.1-P	Field mustard	cytosol	57.28	57.84
CDX90576	Canola	cytosol	57.28	57.84
CDY09747	Canola	cytosol	57.28	57.84
CDY22746	Canola	cytosol	57.28	57.84
CDY54296	Canola	cytosol	57.28	57.84
AT3G21460.1	Thale cress	mitochondrion	56.31	56.86
Bra038075.1-P	Field mustard	cytosol	56.31	56.86
CDY09079	Canola	cytosol	56.31	56.86
CDY32430	Canola	cytosol, plastid	56.31	56.86
CDY54294	Canola	cytosol	56.31	56.86
PGSC0003DMT400013649	Potato	cytosol	56.31	56.86
Bra038076.1-P	Field mustard	cytosol, extracellular	55.34	56.44
CDY09078	Canola	cytosol, extracellular	55.34	56.44
CDY22745	Canola	cytosol, extracellular	55.34	56.44
Bra001830.1-P	Field mustard	cytosol, plastid	55.34	55.88
Bra001831.1-P	Field mustard	cytosol	55.34	55.88
CDY32431	Canola	cytosol	55.34	55.88
CDY48890	Canola	cytosol, plastid	55.34	55.88
CDY48891	Canola	cytosol	55.34	55.88
KRG96387	Soybean	cytosol	55.34	55.88
KRH31918	Soybean	cytosol	55.34	55.88
KRH68127	Soybean	cytosol	55.34	55.88
KRH71537	Soybean	cytosol	55.34	55.88
PGSC0003DMT400029596	Potato	cytosol	55.34	55.88
PGSC0003DMT400041381	Potato	cytosol, plastid	55.34	55.88
Solyc06g008750.1.1	Tomato	cytosol	55.34	55.88
AT1G06830.1	Thale cress	cytosol	53.4	55.56
Bra031540.1-P	Field mustard	cytosol	53.4	55.56
CDY06230	Canola	cytosol	53.4	55.56
CDY09953	Canola	cytosol	53.4	55.56
Bra033499.1-P	Field mustard	cytosol	52.43	55.1
Bra004424.1-P	Field mustard	cytosol	54.37	54.9
Bra023883.1-P	Field mustard	cytosol, plastid	54.37	54.9
CDX80139	Canola	cytosol	54.37	54.9
CDY19270	Canola	cytosol, plastid	54.37	54.9
CDY37292	Canola	cytosol, plastid	54.37	54.9
CDY53024	Canola	cytosol	54.37	54.9
PGSC0003DMT400029525	Potato	cytosol	54.37	54.9
Solyc09g074580.1.1	Tomato	cytosol	54.37	54.9
CDY10229	Canola	cytosol	52.43	54.55
Solyc06g008760.1.1	Tomato	cytosol	53.4	54.46
Os05t0149950-00	Rice	cytosol, mitochondrion	60.19	54.39
AT2G47880.1	Thale cress	cytosol	53.4	53.92
PGSC0003DMT400029597	Potato	cytosol	53.4	53.92
Solyc04g011790.1.1	Tomato	cytosol, plastid	53.4	53.92
Solyc09g074590.1.1	Tomato	cytosol	53.4	53.92
Solyc09g074600.1.1	Tomato	cytosol	53.4	53.92
CDY69190	Canola	cytosol	54.37	53.85
PGSC0003DMT400041379	Potato	cytosol, plastid	49.51	53.68
AT2G47870.1	Thale cress	cytosol	53.4	53.4
CDY53023	Canola	cytosol	53.4	53.4
PGSC0003DMT400042706	Potato	cytosol	53.4	53.4
Solyc06g054570.1.1	Tomato	cytosol	53.4	53.4
CDY27469	Canola	cytosol	54.37	53.33
AT2G30540.1	Thale cress	cytosol	52.43	52.94
PGSC0003DMT400041380	Potato	cytosol, plastid	52.43	52.94
Solyc04g011830.1.1	Tomato	cytosol, plastid	52.43	52.94
Solyc04g011870.1.1	Tomato	cytosol, plastid	52.43	52.94
VIT_07s0104g01400.t01	Wine grape	cytosol	52.43	52.94
Solyc04g011820.1.1	Tomato	cytosol	48.54	52.63
PGSC0003DMT400079099	Potato	cytosol	49.51	52.58
CDY54881	Canola	cytosol	50.49	52.53
AT3G62950.1	Thale cress	cytosol	52.43	52.43
Bra004426.1-P	Field mustard	cytosol	52.43	52.43
Bra014380.1-P	Field mustard	cytosol	52.43	52.43
CDX80138	Canola	cytosol	52.43	52.43
CDX89161	Canola	cytosol	52.43	52.43
CDY55528	Canola	cytosol	53.4	52.38
AT3G62960.1	Thale cress	cytosol	51.46	51.96
Bra007718.1-P	Field mustard	cytosol	51.46	51.96
Bra021641.1-P	Field mustard	cytosol	51.46	51.96
CDX76678	Canola	cytosol	51.46	51.96
CDX95739	Canola	cytosol	51.46	51.96
CDY11466	Canola	cytosol	51.46	51.96
CDY23990	Canola	cytosol	51.46	51.96
CDY29666	Canola	cytosol	51.46	51.96
CDY52638	Canola	cytosol	51.46	51.96
PGSC0003DMT400027946	Potato	cytosol, plastid	51.46	51.96
PGSC0003DMT400041382	Potato	cytosol	51.46	51.96
Solyc04g011850.1.1	Tomato	cytosol	51.46	51.96
Bra007717.1-P	Field mustard	cytosol	38.84	51.95
CDX76677	Canola	cytosol	51.46	51.46
CDY11464	Canola	cytosol	51.46	51.46
CDY11465	Canola	cytosol	51.46	51.46
Bra021444.1-P	Field mustard	cytosol	52.43	51.43
Bra014379.1-P	Field mustard	cytosol	50.49	50.98
Bra018307.1-P	Field mustard	cytosol	50.49	50.98
CDX84825	Canola	cytosol	50.49	50.98
CDX89162	Canola	cytosol	50.49	50.98
CDX97824	Canola	cytosol	50.49	50.98
CDY10745	Canola	cytosol	50.49	50.98
CDY68061	Canola	cytosol	50.49	50.98
PGSC0003DMT400027948	Potato	cytosol, plastid	50.49	50.98
PGSC0003DMT400027950	Potato	cytosol, plastid	50.49	50.98
PGSC0003DMT400027951	Potato	cytosol, plastid	50.49	50.98
Solyc04g011810.1.1	Tomato	cytosol, plastid	50.49	50.98
Solyc04g011860.1.1	Tomato	cytosol, plastid	50.49	50.98
PGSC0003DMT400027952	Potato	cytosol	46.6	50.53
PGSC0003DMT400027953	Potato	cytosol, plastid	49.51	50.49
Os01t0936000-00	Rice	cytosol	61.16	50.4
Bra003517.1-P	Field mustard	cytosol, extracellular	49.51	50.0
KRG96389	Soybean	cytosol	49.51	50.0
KRH68129	Soybean	cytosol	49.51	50.0
PGSC0003DMT400027947	Potato	cytosol, plastid	49.51	50.0
PGSC0003DMT400027949	Potato	cytosol, plastid	49.51	50.0
PGSC0003DMT400027954	Potato	cytosol, plastid	49.51	50.0
Solyc04g011800.1.1	Tomato	cytosol, plastid	49.51	50.0
Solyc04g011840.1.1	Tomato	cytosol	49.51	50.0
Solyc05g051730.1.1	Tomato	cytosol	49.51	49.51
PGSC0003DMT400077394	Potato	cytosol	49.51	49.04
Solyc05g051720.1.1	Tomato	cytosol	49.51	49.04
PGSC0003DMT400041378	Potato	cytosol, plastid	48.54	49.02
Solyc04g011880.1.1	Tomato	cytosol, plastid	48.54	49.02
Os02t0512400-01	Rice	cytosol	64.08	48.89
PGSC0003DMT400077393	Potato	cytosol	48.54	48.54
VIT_07s0104g01420.t01	Wine grape	cytosol	49.51	48.11
Solyc04g011780.1.1	Tomato	extracellular	47.57	48.04
Os04t0393500-01	Rice	cytosol	62.14	47.41
Bra032563.1-P	Field mustard	cytosol	46.6	47.06
CDY32493	Canola	cytosol	46.6	47.06
KRH31917	Soybean	cytosol	46.6	47.06
AT1G03020.1	Thale cress	cytosol	45.63	46.08
CDY18141	Canola	cytosol	45.63	46.08
KRH71538	Soybean	cytosol	45.63	46.08
PGSC0003DMT400029673	Potato	cytosol	46.6	45.28
Bra003515.1-P	Field mustard	cytosol	44.66	45.1
Bra014382.1-P	Field mustard	cytosol	44.66	45.1
Bra033366.1-P	Field mustard	cytosol	44.66	45.1
CDX67910	Canola	cytosol	44.66	45.1
CDX89159	Canola	cytosol	44.66	45.1
CDX89921	Canola	cytosol	44.66	45.1
CDX93949	Canola	cytosol	44.66	45.1
Solyc09g074570.1.1	Tomato	cytosol	45.63	44.34
AT3G62930.1	Thale cress	cytosol	43.69	44.12
CDY25124	Canola	cytosol	43.69	44.12
Bra007714.1-P	Field mustard	cytosol	42.72	43.14
CDX76675	Canola	cytosol	42.72	43.14
CDY11462	Canola	cytosol	42.72	43.14
Solyc04g053110.1.1	Tomato	cytosol	42.72	43.14
PGSC0003DMT400042707	Potato	cytosol	41.75	42.16
KRH31916	Soybean	cytosol	38.84	42.11
KRH68130	Soybean	cytosol, plastid	41.75	40.95
KRG96390	Soybean	cytosol, plastid	40.78	40.0
KRH31915	Soybean	cytosol, plastid	38.84	38.1
Bra015532.1-P	Field mustard	cytosol	50.49	35.86
CDY71728	Canola	cytosol	43.69	31.69
Os07t0151100-01	Rice	cytosol	54.37	29.17
CDX97821	Canola	mitochondrion	35.92	27.82
PGSC0003DMT400013650	Potato	cytosol	41.75	14.58

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EntrezGene:4352425	ProteinID:ABA99336.1	ProteinID:BAF29961.2	ProteinID:BAT17477.1
ProteinID:EAZ20751.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	EnsemblPlantsGene:Os12g0538600	EnsemblPlants:Os12t0538600-00	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF98	UniProt:Q0IMV4	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI0000680EE8	RefSeq:XP_015619548.1	:	:	:

Description

GLUTAREDOXIN 28Thioredoxin fold domain containing protein. (Os12t0538600-00)

Coordinates

chr12:+:21469144..21469455

Molecular Weight (calculated)

11200.2 Da

IEP (calculated)

8.687

GRAVY (calculated)

0.392

Length

103 amino acids

Sequence
(BLAST)

001: MDRVMKLASE RAVVIFTLSS CCMCHTVTRL FCDLGVNALV HELDQDPRGK EMERALLKLL GRGPPVPVVF IGGKLVGGTN KIMSLHLGGE LIPMLKNAGA
101: LWL

Best Arabidopsis Sequence Match ( AT4G15680.1 )
(BLAST)

001: MDKLQKMISE KSVVIFSKNS CCMSHTIKTL FIDFGVNPTI YELDEINRGK EIEQALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRVGAL
101: WL

Arabidopsis Description

GRXS4Monothiol glutaredoxin-S4 [Source:UniProtKB/Swiss-Prot;Acc:O23419]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.