Factsheet for Os03t0422702-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0102600-01
Os02t0687500-01
Os02t0747400-01
Os02t0828566-01
Os03t0422702-00
Os05t0569500-01
Os06t0226700-01
Os07t0412400-01
Os10t0565500-01
Os11t0636900-02
Os12t0274700-01
Os12t0291100-01
Os12t0291200-00
Os12t0291400-01
Os12t0292400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08330.1	Os05t0569500-01	AT2G31985.1	21798944
AT5G08330.1	Os02t0747400-01	AT3G47620.1	21798944
AT5G08330.1	Os06t0226700-01	AT3G47620.1	21798944
AT5G08330.1	Os02t0687500-01	AT4G17680.1	21798944
AT5G08330.1	Os10t0565500-01	AT4G17680.1	21798944
AT5G08330.1	Os11t0636900-02	AT4G36690.1	21798944
AT5G08330.1	Os02t0102600-01	AT5G07840.1	21798944
AT5G08330.1	Os02t0828566-01	AT5G08330.1	21798944
AT5G08330.1	Os03t0422702-00	AT5G08330.1	21798944
AT5G08330.1	Os12t0274700-01	AT5G38420.1	21798944
AT5G08330.1	Os12t0291100-01	AT5G38420.1	21798944
AT5G08330.1	Os12t0291200-00	AT5G38420.1	21798944
AT5G08330.1	Os12t0291400-01	AT5G38420.1	21798944
AT5G08330.1	Os12t0292400-01	AT5G38420.1	21798944
AT5G08330.1	Os07t0412400-01	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40752	Canola	cytosol	56.35	40.11
CDX78335	Canola	nucleus	54.76	39.2
CDX81094	Canola	nucleus	55.56	38.89
Os02t0828566-01	Rice	nucleus	65.87	35.17
Os02t0635800-01	Rice	nucleus	57.14	34.12
Os04t0526000-01	Rice	plastid	55.56	33.98
CDX87179	Canola	nucleus	57.94	33.95
CDY16842	Canola	nucleus	57.14	33.49
Bra026506.1-P	Field mustard	cytosol, mitochondrion, nucleus	57.14	33.33
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	64.29	33.2
CDY44770	Canola	cytosol	58.73	32.89
KRG89108	Soybean	nucleus, plastid	59.52	32.33
Bra009338.1-P	Field mustard	nucleus	60.32	32.2
CDY46951	Canola	nucleus	58.73	32.17
CDY40799	Canola	nucleus	58.73	32.17
VIT_10s0042g00170.t01	Wine grape	nucleus	65.08	32.16
Bra005984.1-P	Field mustard	nucleus	59.52	32.05
AT5G08330.1	Thale cress	nucleus	60.32	31.8
Bra028662.1-P	Field mustard	nucleus	57.14	31.44
KRG90619	Soybean	nucleus	60.32	31.41
CDY45760	Canola	nucleus	60.32	31.41
CDY21536	Canola	nucleus	58.73	31.36
KRH40904	Soybean	nucleus	58.73	30.96
KRH36141	Soybean	nucleus	60.32	30.89
KRH40902	Soybean	nucleus	58.73	30.83
Bra029366.1-P	Field mustard	cytosol	42.86	30.68
Solyc01g008230.2.1	Tomato	nucleus	60.32	30.52
Bra009667.1-P	Field mustard	nucleus	59.52	30.0
Solyc04g009180.1.1	Tomato	nucleus	62.7	29.7
CDX88010	Canola	nucleus	59.52	29.64
AT5G23280.1	Thale cress	nucleus	58.73	29.6
Os04t0194600-01	Rice	plastid	38.89	27.84
Os04t0542302-00	Rice	cytosol, mitochondrion, nucleus	37.3	24.74
PGSC0003DMT400042166	Potato	cytosol	59.52	16.74
Os01t0924400-01	Rice	nucleus	41.27	16.4
Os08t0544800-01	Rice	nucleus	48.41	16.35
Os06t0226700-01	Rice	nucleus	46.03	14.99
Os12t0173300-00	Rice	nucleus	49.21	14.83
Os09t0521300-00	Rice	nucleus	42.06	13.91
Os02t0747400-01	Rice	nucleus	45.24	13.9
Os11t0175700-00	Rice	nucleus, plastid	43.65	13.55

Protein Annotations

MapMan:15.5.19	UniProt:A0A0P0VZI7	ProteinID:BAS84752.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR017887	EnsemblPlantsGene:Os03g0422702	EnsemblPlants:Os03t0422702-00	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF7	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0003939901	SEG:seg	:

Description

Similar to predicted protein. (Os03t0422702-00)

Coordinates

chr3:+:17598115..17598735

Molecular Weight (calculated)

13760.9 Da

IEP (calculated)

11.974

GRAVY (calculated)

-0.506

Length

126 amino acids

Sequence
(BLAST)

001: MPCHIHGGAA LDKQLVPTAS KANGTTLAVR KPPSKDRHSK VDGRGRRVRM PIICAARVFQ LTRKLGLKSD GQTIEWLLRE AEPSIIGATG TGTTLASSSP
101: RRPLHPRQAP PCRRRPHHLP LAHSCF

Best Arabidopsis Sequence Match ( AT5G08330.1 )
(BLAST)

001: MADNDGAVSN GIIVEQTSNK GPLNAVKKPP SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT TPASFSTASL
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR

Arabidopsis Description

TCP21Transcription factor TCP21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.