CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40904	Soybean	nucleus	90.52	87.87
KRH40902	Soybean	nucleus	90.52	87.5
KRH36141	Soybean	nucleus	75.86	71.54
KRG90619	Soybean	nucleus	70.69	67.77
Os03t0422702-00	Rice	cytosol, plastid	32.33	59.52
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	61.21	58.2
Solyc01g008230.2.1	Tomato	nucleus	61.64	57.43
Zm00001d018530_P001	Maize	plastid	50.0	56.04
Solyc04g009180.1.1	Tomato	nucleus	64.22	56.02
Os02t0828566-01	Rice	nucleus	56.47	55.51
TraesCS6D01G397000.1	Wheat	mitochondrion	45.26	53.3
TraesCS6A01G412800.1	Wheat	mitochondrion	45.26	53.03
EES07800	Sorghum	plastid	55.17	52.67
TraesCS6B01G462100.1	Wheat	mitochondrion	44.83	52.53
HORVU6Hr1G093960.1	Barley	cytosol, peroxisome	56.47	49.06
KRH30615	Soybean	cytosol	25.0	37.18
KRH32533	Soybean	plastid	25.43	31.05
PGSC0003DMT400042166	Potato	cytosol	59.05	30.58
KRH19921	Soybean	plastid	23.71	29.73
KRG99108	Soybean	nucleus	31.03	26.37
KRH45889	Soybean	nucleus	31.9	25.87
KRH49755	Soybean	nucleus	20.26	23.74
KRH48289	Soybean	nucleus	34.05	23.58
KRH06094	Soybean	plastid	36.64	23.55
KRH65181	Soybean	nucleus	33.62	23.21
KRH35393	Soybean	nucleus	31.03	23.15
KRG94577	Soybean	nucleus	32.33	22.73
KRG91429	Soybean	nucleus	31.9	22.7
KRH03994	Soybean	nucleus	33.19	22.65
KRH57263	Soybean	nucleus	32.76	21.97
KRH06910	Soybean	nucleus	32.33	21.74
KRH63357	Soybean	nucleus	36.64	21.36
KRH54542	Soybean	nucleus	37.07	21.08
KRH03466	Soybean	nucleus	37.07	20.82
KRH56919	Soybean	nucleus	37.07	20.67
KRH26343	Soybean	nucleus, plastid	37.5	20.05
KRH74835	Soybean	nucleus	31.9	19.22
KRH70699	Soybean	nucleus	34.91	19.1

Protein Annotations

EntrezGene:100782271	MapMan:15.5.19	MapMan:27.1.5.3	UniProt:A0A0R0EGN5	EMBL:ACUP02012186	EnsemblPlantsGene:GLYMA_20G001600
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	EnsemblPlants:KRG89108	ProteinID:KRG89108
ProteinID:KRG89108.1	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF73	InterPro:TF_TCP_subgr
InterPro:Transcription_factor_TCP	UniParc:UPI000233D905	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:168241..170379

Molecular Weight (calculated)

25117.5 Da

IEP (calculated)

10.148

GRAVY (calculated)

-0.616

Length

232 amino acids

Sequence
(BLAST)

001: MSNSHGATNA VTTTNHSNNN TVVDHHQQPT TTALAVKKPP SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT
101: TPASFSTVSD HKPLLPPPTP FILGKRIRPD DDNSAKDDTV SLVVPPTPPS LWALPPRPDF GQVWSFAAPE LVSVSPQNSL FHHHHHHHHQ QAAMGEASAA
201: RLGNYLPGHL NLLASLSGGG HGNSGRRDDE PR

Best Arabidopsis Sequence Match ( AT5G23280.1 )
(BLAST)

001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR

Arabidopsis Description

TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.