Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19921 | Soybean | plastid | 88.42 | 90.81 |
| TraesCS2D01G049400.1 | Wheat | cytosol | 25.26 | 54.55 |
| VIT_08s0040g01600.t01 | Wine grape | nucleus, plastid | 57.89 | 53.92 |
| TraesCS2B01G062900.1 | Wheat | plastid | 36.32 | 43.12 |
| Os04t0194600-01 | Rice | plastid | 38.42 | 41.48 |
| Zm00001d025033_P001 | Maize | plastid | 36.84 | 39.77 |
| EES10469 | Sorghum | plastid | 36.84 | 39.55 |
| KRH30615 | Soybean | cytosol | 27.37 | 33.33 |
| Solyc09g008030.1.1 | Tomato | plastid | 33.16 | 31.34 |
| PGSC0003DMT400055541 | Potato | plastid | 33.16 | 31.34 |
| KRH40904 | Soybean | nucleus | 32.11 | 25.52 |
| KRG89108 | Soybean | nucleus, plastid | 31.05 | 25.43 |
| KRH40902 | Soybean | nucleus | 32.11 | 25.42 |
| KRH36141 | Soybean | nucleus | 32.63 | 25.2 |
| KRG90619 | Soybean | nucleus | 30.53 | 23.97 |
| KRG99108 | Soybean | nucleus | 33.16 | 23.08 |
| KRH45889 | Soybean | nucleus | 34.74 | 23.08 |
| KRH49755 | Soybean | nucleus | 23.16 | 22.22 |
| KRH35393 | Soybean | nucleus | 34.74 | 21.22 |
| KRH48289 | Soybean | nucleus | 36.84 | 20.9 |
| KRH03994 | Soybean | nucleus | 37.37 | 20.88 |
| KRH65181 | Soybean | nucleus | 36.32 | 20.54 |
| KRH57263 | Soybean | nucleus | 37.37 | 20.52 |
| KRG91429 | Soybean | nucleus | 34.74 | 20.25 |
| KRG94577 | Soybean | nucleus | 34.74 | 20.0 |
| KRH06910 | Soybean | nucleus | 34.74 | 19.13 |
| KRH63357 | Soybean | nucleus | 39.47 | 18.84 |
| KRH54542 | Soybean | nucleus | 40.0 | 18.63 |
| KRH06094 | Soybean | plastid | 34.21 | 18.01 |
| KRH03466 | Soybean | nucleus | 37.89 | 17.43 |
| KRH56919 | Soybean | nucleus | 37.89 | 17.31 |
| KRH74835 | Soybean | nucleus | 34.21 | 16.88 |
| KRH70699 | Soybean | nucleus | 36.84 | 16.51 |
| KRH26343 | Soybean | nucleus, plastid | 34.21 | 14.98 |
Protein Annotations
| EntrezGene:100779699 | MapMan:15.5.19 | EMBL:ACUP02006126 | EnsemblPlantsGene:GLYMA_10G057400 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7LHN7 | EnsemblPlants:KRH32533 | ProteinID:KRH32533 | ProteinID:KRH32533.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF71 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI000233CC81 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:5241972..5242880
Molecular Weight (calculated)
20195.0 Da
IEP (calculated)
7.043
GRAVY (calculated)
-0.303
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSQVVLHNN FETQPSVTVT TATNTESPPT APPSLAVVKR PSTKDRHTKV NGRGRRIRMP PLCAARIFQL TRELGHRSDG ETIEWLLRHA EPSIIAATGS
101: GTVPAAPVSS VAPSAPSSEP MVACPVTAVG AQGMFAMAPP QPQPNCRLDL SPPAGLEFAV NGYRHMPFTA LLLQPATAED NQNDESLGEQ
101: GTVPAAPVSS VAPSAPSSEP MVACPVTAVG AQGMFAMAPP QPQPNCRLDL SPPAGLEFAV NGYRHMPFTA LLLQPATAED NQNDESLGEQ
001: MIFQNVCRNE SNFNAIASES RSQTQFGVSK SSSSGGGCIS ARTKDRHTKV NGRSRRVTMP ALAAARIFQL TRELGHKTEG ETIEWLLSQA EPSIIAATGY
101: GTKLISNWVD VAADDSSSSS SMTSPQTQTQ TPQSPSCRLD LCQPIGIQYP VNGYSHMPFT AMLLEPMTTT AESEVEIAEE EERRRRHH
101: GTKLISNWVD VAADDSSSSS SMTSPQTQTQ TPQSPSCRLD LCQPIGIQYP VNGYSHMPFT AMLLEPMTTT AESEVEIAEE EERRRRHH
Arabidopsis Description
TCP11Transcription factor TCP11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.