Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06094 | Soybean | plastid | 73.27 | 88.09 |
| VIT_12s0035g00690.t01 | Wine grape | nucleus, plastid | 59.91 | 56.52 |
| PGSC0003DMT400064164 | Potato | nucleus | 59.68 | 48.5 |
| Solyc01g103780.2.1 | Tomato | nucleus | 44.47 | 43.37 |
| KRG89108 | Soybean | nucleus, plastid | 20.05 | 37.5 |
| KRH40904 | Soybean | nucleus | 20.28 | 36.82 |
| KRH40902 | Soybean | nucleus | 20.28 | 36.67 |
| KRH30615 | Soybean | cytosol | 13.13 | 36.54 |
| KRH49755 | Soybean | nucleus | 16.59 | 36.36 |
| KRH45889 | Soybean | nucleus | 23.73 | 36.01 |
| KRH36141 | Soybean | nucleus | 20.28 | 35.77 |
| KRG90619 | Soybean | nucleus | 19.35 | 34.71 |
| KRG99108 | Soybean | nucleus | 21.66 | 34.43 |
| KRH32533 | Soybean | plastid | 14.98 | 34.21 |
| KRH19921 | Soybean | plastid | 14.29 | 33.51 |
| KRG94577 | Soybean | nucleus | 24.19 | 31.82 |
| GSMUA_Achr6P17840_001 | Banana | cytosol | 27.42 | 30.67 |
| KRH03466 | Soybean | nucleus | 29.03 | 30.51 |
| KRH56919 | Soybean | nucleus | 29.03 | 30.29 |
| KRH06910 | Soybean | nucleus | 23.5 | 29.57 |
| KRH70699 | Soybean | nucleus | 28.34 | 29.01 |
| KRH63357 | Soybean | nucleus | 26.5 | 28.89 |
| KRH74835 | Soybean | nucleus | 25.58 | 28.83 |
| KRH54542 | Soybean | nucleus | 26.73 | 28.43 |
| KRH35393 | Soybean | nucleus | 19.82 | 27.65 |
| KRG91429 | Soybean | nucleus | 20.74 | 27.61 |
| KRH48289 | Soybean | nucleus | 20.74 | 26.87 |
| GSMUA_Achr10P... | Banana | nucleus | 24.65 | 26.49 |
| KRH65181 | Soybean | nucleus | 20.05 | 25.89 |
| KRH57263 | Soybean | nucleus | 20.28 | 25.43 |
| KRH03994 | Soybean | nucleus | 18.89 | 24.12 |
Protein Annotations
| EntrezGene:100814151 | MapMan:15.5.19 | EMBL:ACUP02007707 | EnsemblPlantsGene:GLYMA_12G168300 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7LVD8 | ProteinID:KRH26342.1 | EnsemblPlants:KRH26343 | ProteinID:KRH26343 |
| ProteinID:KRH26343.1 | PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF1 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI0002949DDF | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:32320419..32323195
Molecular Weight (calculated)
46032.0 Da
IEP (calculated)
7.118
GRAVY (calculated)
-0.682
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSDLQNKK QSSSSSSTGA THQQQQQQQQ SSSTHLVVPS PSNSSASLID ASLAIATRSD DSTKKTQQPS TNTKRSTKDR HTKVDGRGRR IRMPATCAAR
101: VFQLTRELGH KSDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGSTLSAPPS KSAPHTFHGA LALAHHPYDE AFQHPALLGF HPHHHQQQLL
201: SADQIAEALP SAGGGDSGGN YLRKRYREDL FKDDNINNTQ SQNDSGDADG DADGDGSSPK LPKEAGSGLL RPTNLLPATA MWASGPPGST IWMLPVTAAA
301: ASSSSSSSSA SSAASSESQM WAFPQSVSGF MPRFNLPVPG ALEFQGARAG SLQLGPSMLM PPPPLPPQQQ QQPSQHLGLA MSDSNLGMLA ALNAYARAGL
401: NINSDHHHHH HHHHHHQHQS QPSESGEDAP NSSQ
101: VFQLTRELGH KSDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGSTLSAPPS KSAPHTFHGA LALAHHPYDE AFQHPALLGF HPHHHQQQLL
201: SADQIAEALP SAGGGDSGGN YLRKRYREDL FKDDNINNTQ SQNDSGDADG DADGDGSSPK LPKEAGSGLL RPTNLLPATA MWASGPPGST IWMLPVTAAA
301: ASSSSSSSSA SSAASSESQM WAFPQSVSGF MPRFNLPVPG ALEFQGARAG SLQLGPSMLM PPPPLPPQQQ QQPSQHLGLA MSDSNLGMLA ALNAYARAGL
401: NINSDHHHHH HHHHHHQHQS QPSESGEDAP NSSQ
001: MDLSDIRNNN NDTAAVATGG GARQLVDASL SIVPRSTPPE DSTLATTSST ATATTTKRST KDRHTKVDGR GRRIRMPALC AARVFQLTRE LGHKSDGETI
101: EWLLQQAEPA IVAATGTGTI PANFSTLSVS LRSSGSTLSA PPSKSVPLYG ALGLTHHQYD EQGGGGVFAA HTSPLLGFHH QLQHHQNQNQ NQDPVETIPE
201: GENFSRKRYR SVDLSKENDD RKQNENKSLK ESETSGPTAA PMWAVAPPSR SGAGNTFWML PVPTTAGNQM ESSSNNNTAA GHRAPPMWPF VNSAGGGAGG
301: GGGAATHFMA GTGFSFPMDQ YRGSPLQLGS FLAQPQPTQN LGLSMPDSNL GMLAALNSAY SRGGNANANA EQANNAVEHQ EKQQQSDHDD DSREENSNSS
401: E
101: EWLLQQAEPA IVAATGTGTI PANFSTLSVS LRSSGSTLSA PPSKSVPLYG ALGLTHHQYD EQGGGGVFAA HTSPLLGFHH QLQHHQNQNQ NQDPVETIPE
201: GENFSRKRYR SVDLSKENDD RKQNENKSLK ESETSGPTAA PMWAVAPPSR SGAGNTFWML PVPTTAGNQM ESSSNNNTAA GHRAPPMWPF VNSAGGGAGG
301: GGGAATHFMA GTGFSFPMDQ YRGSPLQLGS FLAQPQPTQN LGLSMPDSNL GMLAALNSAY SRGGNANANA EQANNAVEHQ EKQQQSDHDD DSREENSNSS
401: E
Arabidopsis Description
TCP8Transcription factor TCP8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C518]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.