Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45889 | Soybean | nucleus | 40.4 | 27.97 |
| KRG99108 | Soybean | nucleus | 38.38 | 27.84 |
| KRH56919 | Soybean | nucleus | 56.06 | 26.68 |
| KRH03466 | Soybean | nucleus | 55.05 | 26.39 |
| VIT_01s0026g02200.t01 | Wine grape | nucleus | 46.46 | 26.06 |
| KRH63357 | Soybean | nucleus | 51.52 | 25.63 |
| KRH54542 | Soybean | nucleus | 52.02 | 25.25 |
| KRH30615 | Soybean | cytosol | 18.69 | 23.72 |
| KRH32533 | Soybean | plastid | 22.22 | 23.16 |
| KRH19921 | Soybean | plastid | 21.21 | 22.7 |
| KRH74835 | Soybean | nucleus | 43.43 | 22.34 |
| KRG90619 | Soybean | nucleus | 26.77 | 21.9 |
| Solyc05g007420.1.1 | Tomato | nucleus | 40.91 | 21.15 |
| PGSC0003DMT400008728 | Potato | nucleus | 39.39 | 21.02 |
| KRH70699 | Soybean | nucleus | 44.95 | 20.99 |
| KRH36141 | Soybean | nucleus | 25.76 | 20.73 |
| KRH40902 | Soybean | nucleus | 24.75 | 20.42 |
| KRG89108 | Soybean | nucleus, plastid | 23.74 | 20.26 |
| KRH40904 | Soybean | nucleus | 24.24 | 20.08 |
| KRG94577 | Soybean | nucleus | 32.83 | 19.7 |
| KRH06910 | Soybean | nucleus | 33.33 | 19.13 |
| KRH06094 | Soybean | plastid | 33.84 | 18.56 |
| KRH26343 | Soybean | nucleus, plastid | 36.36 | 16.59 |
| KRH35393 | Soybean | nucleus | 25.25 | 16.08 |
| KRH48289 | Soybean | nucleus | 26.77 | 15.82 |
| KRG91429 | Soybean | nucleus | 25.76 | 15.64 |
| KRH03994 | Soybean | nucleus | 26.77 | 15.59 |
| KRH57263 | Soybean | nucleus | 26.77 | 15.32 |
| KRH65181 | Soybean | nucleus | 25.76 | 15.18 |
Protein Annotations
| EMBL:ACUP02004629 | EnsemblPlants:KRH49755 | EnsemblPlantsGene:GLYMA_07G177200 | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF40 |
| PFAM:PF03634 | ProteinID:KRH49755 | ProteinID:KRH49755.1 | SEG:seg | UniParc:UPI0006EE07F9 | UniProt:A0A0R0JC96 |
| MapMan:15.5.19 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:33353675..33354400
Molecular Weight (calculated)
21780.5 Da
IEP (calculated)
6.583
GRAVY (calculated)
-0.521
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGEDLHHH HHHHHRHNNF PFQLLEKKED QETASCSTSS LYPSLEISTK PSMSNSTRSN QLVVVAMVEA PNSKKPPPKR TSTKDRHMKL TRELCHKSDG
101: ETIEWLLQQV EPAVIAATGT GIIPANFTSL NISLRSSGSS ITFFPGIAFS SDNTNNNTST LLNFQSNTLN TTMLQQQAMP ELSDGGVSSS LDILDTIV
101: ETIEWLLQQV EPAVIAATGT GIIPANFTSL NISLRSSGSS ITFFPGIAFS SDNTNNNTST LLNFQSNTLN TTMLQQQAMP ELSDGGVSSS LDILDTIV
001: MDPDPDHNHR PNFPLQLLDS STSSSSTSLA IISTTSEPNS EPKKPPPKRT STKDRHTKVE GRGRRIRMPA MCAARVFQLT RELGHKSDGE TIEWLLQQAE
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
Arabidopsis Description
TCP15TCP15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLV7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.