CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03994	Soybean	nucleus	82.66	84.12
VIT_02s0025g04590.t01	Wine grape	nucleus	59.25	49.88
KRH48289	Soybean	nucleus	45.95	47.46
KRH65181	Soybean	nucleus	44.8	46.13
Solyc08g080150.1.1	Tomato	nucleus	47.98	44.86
PGSC0003DMT400058534	Potato	nucleus	48.27	44.65
KRG91429	Soybean	nucleus	41.33	43.87
KRH35393	Soybean	nucleus	39.31	43.73
GSMUA_Achr3P12320_001	Banana	cytosol	22.25	38.12
KRH32533	Soybean	plastid	20.52	37.37
KRH19921	Soybean	plastid	19.36	36.22
KRH30615	Soybean	cytosol	15.32	33.97
KRG89108	Soybean	nucleus, plastid	21.97	32.76
TraesCS4A01G355900.1	Wheat	nucleus	27.17	31.76
KRH40904	Soybean	nucleus	21.68	31.38
KRH40902	Soybean	nucleus	21.68	31.25
KRG90619	Soybean	nucleus	21.68	30.99
KRH36141	Soybean	nucleus	21.97	30.89
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	28.32	30.82
KRG99108	Soybean	nucleus	24.28	30.77
GSMUA_Achr5P03320_001	Banana	cytosol	16.76	30.69
GSMUA_Achr11P...	Banana	nucleus	19.94	30.53
KRH45889	Soybean	nucleus	25.14	30.42
GSMUA_Achr8P00050_001	Banana	cytoskeleton, cytosol, peroxisome	29.77	30.03
GSMUA_Achr4P27220_001	Banana	nucleus	19.08	30.0
Zm00001d031725_P001	Maize	nucleus	30.06	29.71
OQU80770	Sorghum	nucleus	30.35	29.25
TraesCS5B01G516200.1	Wheat	cytosol, nucleus, peroxisome	29.48	29.23
TraesCS5D01G516300.1	Wheat	nucleus	28.9	29.07
Os08t0544800-01	Rice	nucleus	29.77	27.61
HORVU5Hr1G117990.1	Barley	cytosol, mitochondrion, nucleus	29.48	27.2
KRH49755	Soybean	nucleus	15.32	26.77
KRG94577	Soybean	nucleus	23.41	24.55
KRH06094	Soybean	plastid	25.43	24.38
KRH06910	Soybean	nucleus	23.7	23.77
KRH56919	Soybean	nucleus	27.46	22.84
KRH03466	Soybean	nucleus	27.17	22.76
KRH74835	Soybean	nucleus	25.14	22.6
HORVU5Hr1G080210.1	Barley	cytosol	17.63	22.34
KRH70699	Soybean	nucleus	26.59	21.7
TraesCS5D01G316300.1	Wheat	nucleus	20.81	21.56
TraesCS5B01G310000.1	Wheat	cytosol, nucleus, peroxisome	21.1	21.53
KRH63357	Soybean	nucleus	24.57	21.36
KRH54542	Soybean	nucleus	25.14	21.32
TraesCS5A01G309300.1	Wheat	cytosol, nucleus, peroxisome	20.52	21.01
EER99208	Sorghum	nucleus	19.36	20.55
KRH26343	Soybean	nucleus, plastid	25.43	20.28
Zm00001d006165_P001	Maize	nucleus	18.79	19.7
Os09t0521300-00	Rice	nucleus	19.94	18.11

Protein Annotations

EntrezGene:100797827	MapMan:15.5.19	EMBL:ACUP02002823	EnsemblPlantsGene:GLYMA_05G050400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	UniProt:I1K0E3	InterPro:IPR017887	EnsemblPlants:KRH57263	ProteinID:KRH57263	ProteinID:KRH57263.1
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF15	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI000233A10C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:4505731..4507432

Molecular Weight (calculated)

36461.8 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.392

Length

346 amino acids

Sequence
(BLAST)

001: MDQDDDEAGT TNLSTSDADV AEKETTNNLN GVPKQNNAFE ETTGFQVLPL KKEEPTYSDP DTEIVPVKLP KRSSTKDRHT KVEGRGRRIR IPATCAARIF
101: QLTRELGHKS DGETVRWLLE HAEPAIIEAT GTGTVPAIAV SVGGALKIPT TSSNSNEEAA AAAASSNKKR KRPSNSEFVD INININDAVS KSSGLAPVHV
201: PQGLVPVWAV SNPSMVIPAN TFWMIPQAAT TPNPSGGVAG PASQQPQLWA LSPSVFNVAA RPISPLVTTN IPEARPVMTA CSNGSNSAVS TSTVGAKLAT
301: KSSMAPSVSS SGTKSGKTQM LRDFSLEICD KQELQLLGRS GTHAQS

Best Arabidopsis Sequence Match ( AT2G45680.1 )
(BLAST)

001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH

Arabidopsis Description

TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.