CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70699	Soybean	nucleus	90.39	82.08
VIT_01s0026g02200.t01	Wine grape	nucleus	48.31	52.69
KRH54542	Soybean	nucleus	49.61	46.81
KRH03466	Soybean	nucleus	49.35	46.0
KRH56919	Soybean	nucleus	49.61	45.91
KRH63357	Soybean	nucleus	47.27	45.73
KRH45889	Soybean	nucleus	33.25	44.76
KRG99108	Soybean	nucleus	31.69	44.69
KRH49755	Soybean	nucleus	22.34	43.43
KRH30615	Soybean	cytosol	14.29	35.26
PGSC0003DMT400008728	Potato	nucleus	33.51	34.77
KRG90619	Soybean	nucleus	21.82	34.71
KRH32533	Soybean	plastid	16.88	34.21
Solyc05g007420.1.1	Tomato	nucleus	34.03	34.2
KRH36141	Soybean	nucleus	21.56	33.74
KRH19921	Soybean	plastid	16.1	33.51
KRG89108	Soybean	nucleus, plastid	19.22	31.9
KRH40904	Soybean	nucleus	19.74	31.8
KRH40902	Soybean	nucleus	19.74	31.67
KRH06094	Soybean	plastid	29.61	31.58
KRH35393	Soybean	nucleus	22.86	28.3
KRG94577	Soybean	nucleus	23.64	27.58
KRG91429	Soybean	nucleus	23.12	27.3
KRH06910	Soybean	nucleus	23.64	26.38
KRH26343	Soybean	nucleus, plastid	28.83	25.58
KRH03994	Soybean	nucleus	22.34	25.29
KRH57263	Soybean	nucleus	22.6	25.14
KRH48289	Soybean	nucleus	21.3	24.48
KRH65181	Soybean	nucleus	21.04	24.11

Protein Annotations

MapMan:15.5.19	EMBL:ACUP02000080	EnsemblPlantsGene:GLYMA_01G045500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR017887	UniProt:K7K1T1	EnsemblPlants:KRH74835	ProteinID:KRH74835	ProteinID:KRH74835.1	PFAM:PF03634
PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF40	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0002337301
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:5226449..5228845

Molecular Weight (calculated)

40168.8 Da

IEP (calculated)

7.256

GRAVY (calculated)

-0.411

Length

385 amino acids

Sequence
(BLAST)

001: MELEADHQNG IRSRPNFPLQ LLEKKDVDDV TEQPCSTTSV VTTAAATITS GNNDLHVAEQ SKKPPPKRSS TKDRHTKVDG RGRRIRMPAA CAARVFQLTR
101: ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSTMS APSHYFRGNY FNPSTFSTSA AAASAAAVAQ LRSRAEWDRN MSMVMEDSRR
201: SMLENTSSIS AILNFNPMGN VNVIQQAKQE LREESAAAGG GGSLDSVASD SDGSLGRKRR PEQELSQMGS YLIQSSTGSL PSSHASNTAA FWMVAGHGNQ
301: AMSGGGGSDG SSDNPIWAIP SVGNSGVYRG AMSAPGGIHF MNFASPMNLI PGAQLGSAMV GGGSGGGNSG SQLLSESNLG SACGP

Best Arabidopsis Sequence Match ( AT3G47620.1 )
(BLAST)

001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD

Arabidopsis Description

TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.