Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48289 | Soybean | nucleus | 92.86 | 93.13 |
| CDX95656 | Canola | nucleus | 46.73 | 53.58 |
| VIT_15s0048g01150.t01 | Wine grape | nucleus | 52.98 | 52.51 |
| Bra000395.1-P | Field mustard | nucleus | 47.92 | 51.77 |
| CDY53888 | Canola | nucleus | 47.92 | 51.77 |
| CDY18910 | Canola | nucleus | 50.0 | 51.69 |
| CDX74756 | Canola | nucleus | 49.7 | 51.38 |
| Bra004929.1-P | Field mustard | nucleus | 49.4 | 51.23 |
| AT2G45680.1 | Thale cress | cytosol | 52.08 | 49.16 |
| KRH35393 | Soybean | nucleus | 42.26 | 45.66 |
| KRH57263 | Soybean | nucleus | 46.13 | 44.8 |
| KRH03994 | Soybean | nucleus | 45.24 | 44.71 |
| KRG91429 | Soybean | nucleus | 43.15 | 44.48 |
| KRH32533 | Soybean | plastid | 20.54 | 36.32 |
| KRH19921 | Soybean | plastid | 19.64 | 35.68 |
| GSMUA_Achr3P12320_001 | Banana | cytosol | 21.43 | 35.64 |
| KRH30615 | Soybean | cytosol | 16.07 | 34.62 |
| KRH36141 | Soybean | nucleus | 25.0 | 34.15 |
| KRG89108 | Soybean | nucleus, plastid | 23.21 | 33.62 |
| KRH40904 | Soybean | nucleus | 23.81 | 33.47 |
| KRH40902 | Soybean | nucleus | 23.81 | 33.33 |
| KRG90619 | Soybean | nucleus | 23.81 | 33.06 |
| GSMUA_Achr11P... | Banana | nucleus | 22.02 | 32.74 |
| PGSC0003DMT400088049 | Potato | cytosol | 26.19 | 32.59 |
| PGSC0003DMT400094424 | Potato | cytosol | 23.51 | 32.24 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 30.36 | 32.08 |
| TraesCS4A01G355900.1 | Wheat | nucleus | 27.68 | 31.42 |
| GSMUA_Achr4P27220_001 | Banana | nucleus | 20.54 | 31.36 |
| GSMUA_Achr5P03320_001 | Banana | cytosol | 17.56 | 31.22 |
| GSMUA_Achr8P00050_001 | Banana | cytoskeleton, cytosol, peroxisome | 31.85 | 31.2 |
| Zm00001d031725_P001 | Maize | nucleus | 31.25 | 30.0 |
| OQU80770 | Sorghum | nucleus | 31.55 | 29.53 |
| KRG99108 | Soybean | nucleus | 23.81 | 29.3 |
| TraesCS5D01G516300.1 | Wheat | nucleus | 29.76 | 29.07 |
| TraesCS5B01G516200.1 | Wheat | cytosol, nucleus, peroxisome | 30.06 | 28.94 |
| KRH45889 | Soybean | nucleus | 24.11 | 28.32 |
| Os08t0544800-01 | Rice | nucleus | 30.95 | 27.88 |
| HORVU5Hr1G117990.1 | Barley | cytosol, mitochondrion, nucleus | 30.06 | 26.93 |
| KRH49755 | Soybean | nucleus | 15.18 | 25.76 |
| KRH06094 | Soybean | plastid | 26.79 | 24.93 |
| KRG94577 | Soybean | nucleus | 23.81 | 24.24 |
| HORVU5Hr1G080210.1 | Barley | cytosol | 19.64 | 24.18 |
| KRH06910 | Soybean | nucleus | 23.81 | 23.19 |
| EER99208 | Sorghum | nucleus | 20.83 | 21.47 |
| KRH03466 | Soybean | nucleus | 26.19 | 21.31 |
| KRH56919 | Soybean | nucleus | 26.19 | 21.15 |
| KRH74835 | Soybean | nucleus | 24.11 | 21.04 |
| Zm00001d006165_P001 | Maize | nucleus | 20.54 | 20.91 |
| Os09t0521300-00 | Rice | nucleus | 23.51 | 20.73 |
| TraesCS5D01G316300.1 | Wheat | nucleus | 20.54 | 20.66 |
| TraesCS5B01G310000.1 | Wheat | cytosol, nucleus, peroxisome | 20.83 | 20.65 |
| TraesCS5A01G309300.1 | Wheat | cytosol, nucleus, peroxisome | 20.54 | 20.41 |
| KRH63357 | Soybean | nucleus | 23.81 | 20.1 |
| KRH26343 | Soybean | nucleus, plastid | 25.89 | 20.05 |
| KRH54542 | Soybean | nucleus | 24.11 | 19.85 |
| KRH70699 | Soybean | nucleus | 24.7 | 19.58 |
Protein Annotations
| EntrezGene:100814309 | MapMan:15.5.19 | EMBL:ACUP02001315 | EnsemblPlantsGene:GLYMA_03G018800 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | UniProt:I1JKG8 | InterPro:IPR017887 | EnsemblPlants:KRH65181 | ProteinID:KRH65181 | ProteinID:KRH65181.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF69 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI00023BD8F7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:1875182..1876855
Molecular Weight (calculated)
35877.8 Da
IEP (calculated)
10.204
GRAVY (calculated)
-0.328
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEASGDVD LRLGEPKGPK EEPETEEGSA IRVMPVAVHV PAGMSMSMSK ALAQAQVQAQ PQKRASIKDR HTKVEGRGRR IRMPATCAAR IFQLTRELGH
101: KSDGETIRWL LEHAEPAIIA ATGTGTVPAI AMSVNGTLKI PTTSPSDQEP GEPPERKKRK RPANSAYVDI NGAAVSVSAG LASSIINNNN QNAATTMTTT
201: MAIPQHTAIP LPQGMVPVWA IPSNAVVPAA GAFFVVPQTA SFQHQPQFFT IARPISEFVS SMVTPVVQLQ PTSINSSTNT NSNASSTAPS SKSPARATVM
301: APTTTTTTTR QMLRDFSLEI YDKQELQFMS RASSKH
101: KSDGETIRWL LEHAEPAIIA ATGTGTVPAI AMSVNGTLKI PTTSPSDQEP GEPPERKKRK RPANSAYVDI NGAAVSVSAG LASSIINNNN QNAATTMTTT
201: MAIPQHTAIP LPQGMVPVWA IPSNAVVPAA GAFFVVPQTA SFQHQPQFFT IARPISEFVS SMVTPVVQLQ PTSINSSTNT NSNASSTAPS SKSPARATVM
301: APTTTTTTTR QMLRDFSLEI YDKQELQFMS RASSKH
001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
Arabidopsis Description
TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.