Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45889 | Soybean | nucleus | 83.52 | 79.72 |
| KRH49755 | Soybean | nucleus | 27.84 | 38.38 |
| KRH30615 | Soybean | cytosol | 20.88 | 36.54 |
| Bra004407.1-P | Field mustard | nucleus, plastid | 42.12 | 35.83 |
| CDY68276 | Canola | nucleus, plastid | 42.12 | 35.83 |
| CDY01754 | Canola | nucleus, plastid | 42.12 | 35.6 |
| AT1G69690.1 | Thale cress | nucleus, plastid | 42.12 | 35.38 |
| CDY28576 | Canola | nucleus | 41.03 | 35.22 |
| Bra003986.1-P | Field mustard | cytosol | 30.4 | 33.88 |
| CDY28577 | Canola | cytosol | 29.67 | 33.33 |
| KRH32533 | Soybean | plastid | 23.08 | 33.16 |
| KRG90619 | Soybean | nucleus | 29.3 | 33.06 |
| KRH19921 | Soybean | plastid | 22.34 | 32.97 |
| Bra007875.1-P | Field mustard | cytosol | 29.67 | 32.93 |
| KRH36141 | Soybean | nucleus | 29.3 | 32.52 |
| KRH74835 | Soybean | nucleus | 44.69 | 31.69 |
| KRG89108 | Soybean | nucleus, plastid | 26.37 | 31.03 |
| KRH70699 | Soybean | nucleus | 47.62 | 30.66 |
| KRH63357 | Soybean | nucleus | 43.96 | 30.15 |
| KRH40904 | Soybean | nucleus | 26.01 | 29.71 |
| KRH54542 | Soybean | nucleus | 44.32 | 29.66 |
| KRH40902 | Soybean | nucleus | 26.01 | 29.58 |
| KRH56919 | Soybean | nucleus | 44.32 | 29.09 |
| KRH03466 | Soybean | nucleus | 43.59 | 28.81 |
| KRH35393 | Soybean | nucleus | 29.67 | 26.05 |
| KRH06094 | Soybean | plastid | 34.43 | 26.04 |
| KRG91429 | Soybean | nucleus | 30.04 | 25.15 |
| KRG94577 | Soybean | nucleus | 30.04 | 24.85 |
| KRH06910 | Soybean | nucleus | 30.77 | 24.35 |
| KRH57263 | Soybean | nucleus | 30.77 | 24.28 |
| KRH48289 | Soybean | nucleus | 29.67 | 24.18 |
| KRH03994 | Soybean | nucleus | 30.04 | 24.12 |
| KRH65181 | Soybean | nucleus | 29.3 | 23.81 |
| KRH26343 | Soybean | nucleus, plastid | 34.43 | 21.66 |
Protein Annotations
| EntrezGene:102665446 | MapMan:15.5.19 | EMBL:ACUP02010965 | EnsemblPlantsGene:GLYMA_18G121400 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7MRJ5 | ProteinID:KRG99107.1 | EnsemblPlants:KRG99108 | ProteinID:KRG99108 |
| ProteinID:KRG99108.1 | PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF72 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI00023DAA0B | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:15253731..15256736
Molecular Weight (calculated)
30209.2 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.691
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQRVHHDE NVTRKPNFPL QLLEKKDEGP PPPPSAAKAK RAPTKDRHTK VEGRGRRIRM PAACAARVFQ LTRELGHKSD GETIEWLLRE AEPAVISATG
101: TGTIPANFTS LNVSLRSSGS SQSHYFLNRH NNLHNHNTNN YPFFTTTTPP EFSSSGSYFK SHPSFSLMQN SRRFSRKRRH EVISHVGNYC LSQMCTDSVP
201: AMMSGADSVW AIPSVASSSA SGIHFTNFAS LLTGQHVGGA MVSSETNFNV LATLNAYSGQ QPHHRHEGEE TNN
101: TGTIPANFTS LNVSLRSSGS SQSHYFLNRH NNLHNHNTNN YPFFTTTTPP EFSSSGSYFK SHPSFSLMQN SRRFSRKRRH EVISHVGNYC LSQMCTDSVP
201: AMMSGADSVW AIPSVASSSA SGIHFTNFAS LLTGQHVGGA MVSSETNFNV LATLNAYSGQ QPHHRHEGEE TNN
001: MDPDPDHNHR PNFPLQLLDS STSSSSTSLA IISTTSEPNS EPKKPPPKRT STKDRHTKVE GRGRRIRMPA MCAARVFQLT RELGHKSDGE TIEWLLQQAE
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS
Arabidopsis Description
TCP15TCP15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLV7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.