Factsheet for AT1G69690.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003986.1-P	Field mustard	cytosol	70.15	93.06
CDY28577	Canola	cytosol	66.15	88.48
Bra007875.1-P	Field mustard	cytosol	66.46	87.8
CDY28576	Canola	nucleus	84.92	86.79
CDY01754	Canola	nucleus, plastid	86.15	86.69
CDY68276	Canola	nucleus, plastid	85.54	86.6
Bra004407.1-P	Field mustard	nucleus, plastid	85.54	86.6
VIT_01s0026g02200.t01	Wine grape	nucleus	51.08	47.03
KRH45889	Soybean	nucleus	37.85	43.01
KRG99108	Soybean	nucleus	35.38	42.12
PGSC0003DMT400008728	Potato	nucleus	38.77	33.96
Solyc05g007420.1.1	Tomato	nucleus	39.69	33.68
AT1G35560.1	Thale cress	nucleus, plastid	34.15	32.55
AT5G08330.1	Thale cress	nucleus	23.69	32.22
AT2G37000.1	Thale cress	nucleus, plastid	18.46	31.91
AT3G47620.1	Thale cress	nucleus	47.69	31.7
AT5G23280.1	Thale cress	nucleus	23.38	30.4
AT3G45150.1	Thale cress	nucleus	14.77	29.09
AT3G27010.1	Thale cress	nucleus	28.0	28.98
AT5G51910.1	Thale cress	nucleus	25.23	27.99
AT5G41030.1	Thale cress	nucleus	20.62	27.57
AT1G58100.1	Thale cress	nucleus	33.23	26.93
AT1G72010.1	Thale cress	nucleus, plastid	30.46	26.4
AT2G45680.1	Thale cress	cytosol	26.46	24.16

Protein Annotations

MapMan:15.5.19	EntrezGene:843305	UniProt:A0A178WLV7	ProteinID:AAG52540.1	ProteinID:AEE34963.1	ArrayExpress:AT1G69690
EnsemblPlantsGene:AT1G69690	RefSeq:AT1G69690	TAIR:AT1G69690	RefSeq:AT1G69690-TAIR-G	EnsemblPlants:AT1G69690.1	TAIR:AT1G69690.1
EMBL:AY056384	EMBL:AY081706	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049
GO:GO:0007275	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0008283	GO:GO:0009058
GO:GO:0009719	GO:GO:0009735	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010229
GO:GO:0010252	GO:GO:0031540	GO:GO:0042023	GO:GO:0048467	InterPro:IPR017887	RefSeq:NP_564973.1
ProteinID:OAP19196.1	PFAM:PF03634	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF70	UniProt:Q9C9L2
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000009C948	SEG:seg	:	:

Description

TCP15TCP15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLV7]

Coordinates

chr1:+:26216009..26218071

Molecular Weight (calculated)

34754.7 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.770

Length

325 amino acids

Sequence
(BLAST)

001: MDPDPDHNHR PNFPLQLLDS STSSSSTSLA IISTTSEPNS EPKKPPPKRT STKDRHTKVE GRGRRIRMPA MCAARVFQLT RELGHKSDGE TIEWLLQQAE
101: PAVIAATGTG TIPANFTSLN ISLRSSRSSL SAAHLRTTPS SYYFHSPHQS MTHHLQHQHQ VRPKNESHSS SSSSSQLLDH NQMGNYLVQS TAGSLPTSQS
201: PATAPFWSSG DNTQNLWAFN INPHHSGVVA GDVYNPNSGG SGGGSGVHLM NFAAPIALFS GQPLASGYGG GGGGGGEHSH YGVLAALNAA YRPVAETGNH
301: NNNQQNRDGD HHHNHQEDGS TSHHS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.