Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44770 | Canola | cytosol | 81.17 | 86.22 |
| Bra028662.1-P | Field mustard | nucleus | 79.92 | 83.41 |
| AT5G23280.1 | Thale cress | nucleus | 66.53 | 63.6 |
| KRH36141 | Soybean | nucleus | 65.27 | 63.41 |
| KRG90619 | Soybean | nucleus | 62.34 | 61.57 |
| Os03t0422702-00 | Rice | cytosol, plastid | 31.8 | 60.32 |
| Zm00001d018530_P001 | Maize | plastid | 49.79 | 57.49 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 56.07 | 54.92 |
| Os02t0828566-01 | Rice | nucleus | 53.14 | 53.81 |
| TraesCS6D01G397000.1 | Wheat | mitochondrion | 44.35 | 53.81 |
| TraesCS6B01G462100.1 | Wheat | mitochondrion | 44.35 | 53.54 |
| Solyc01g008230.2.1 | Tomato | nucleus | 55.65 | 53.41 |
| Solyc04g009180.1.1 | Tomato | nucleus | 59.41 | 53.38 |
| EES07800 | Sorghum | plastid | 53.97 | 53.09 |
| TraesCS6A01G412800.1 | Wheat | mitochondrion | 43.93 | 53.03 |
| HORVU6Hr1G093960.1 | Barley | cytosol, peroxisome | 54.81 | 49.06 |
| AT2G37000.1 | Thale cress | nucleus, plastid | 24.69 | 31.38 |
| PGSC0003DMT400042166 | Potato | cytosol | 53.97 | 28.79 |
| AT3G45150.1 | Thale cress | nucleus | 19.25 | 27.88 |
| AT5G51910.1 | Thale cress | nucleus | 31.38 | 25.6 |
| AT1G35560.1 | Thale cress | nucleus, plastid | 36.4 | 25.51 |
| AT1G72010.1 | Thale cress | nucleus, plastid | 38.08 | 24.27 |
| AT1G69690.1 | Thale cress | nucleus, plastid | 32.22 | 23.69 |
| AT5G41030.1 | Thale cress | nucleus | 23.43 | 23.05 |
| AT3G27010.1 | Thale cress | nucleus | 30.13 | 22.93 |
| AT2G45680.1 | Thale cress | cytosol | 33.05 | 22.19 |
| AT1G58100.1 | Thale cress | nucleus | 35.98 | 21.45 |
| AT3G47620.1 | Thale cress | nucleus | 35.98 | 17.59 |
Protein Annotations
| MapMan:15.5.19 | MapMan:27.1.5.3 | EntrezGene:830730 | UniProt:A0A178UQG9 | ProteinID:AED91284.1 | EMBL:AF412074 |
| ArrayExpress:AT5G08330 | EnsemblPlantsGene:AT5G08330 | RefSeq:AT5G08330 | TAIR:AT5G08330 | RefSeq:AT5G08330-TAIR-G | EnsemblPlants:AT5G08330.1 |
| TAIR:AT5G08330.1 | EMBL:AY072620 | ProteinID:CAC08333.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042752 | GO:GO:0043433 | GO:GO:0048511 | InterPro:IPR017887 |
| RefSeq:NP_196450.1 | ProteinID:OAO96286.1 | PFAM:PF03634 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF73 | UniProt:Q9FTA2 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000009F35C | SEG:seg | : | : |
Description
TCP21Transcription factor TCP21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA2]
Coordinates
chr5:+:2680401..2681993
Molecular Weight (calculated)
24753.1 Da
IEP (calculated)
10.201
GRAVY (calculated)
-0.390
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MADNDGAVSN GIIVEQTSNK GPLNAVKKPP SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT TPASFSTASL
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.