Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59794 | Soybean | extracellular, plasma membrane | 21.08 | 38.39 |
| PGSC0003DMT400068094 | Potato | extracellular, plasma membrane, vacuole | 57.35 | 34.62 |
| CDY16353 | Canola | cytosol | 58.33 | 34.1 |
| Solyc03g097440.2.1 | Tomato | plastid | 58.82 | 34.09 |
| Bra022523.1-P | Field mustard | endoplasmic reticulum, extracellular | 57.84 | 33.81 |
| CDY34029 | Canola | cytosol | 55.88 | 33.43 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 56.86 | 33.24 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 56.86 | 33.24 |
| CDY68167 | Canola | cytosol | 56.86 | 33.24 |
| Bra000626.1-P | Field mustard | endoplasmic reticulum, extracellular | 55.39 | 33.14 |
| PGSC0003DMT400069254 | Potato | endoplasmic reticulum, extracellular, golgi | 55.88 | 32.66 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 50.98 | 32.3 |
| PGSC0003DMT400092688 | Potato | endoplasmic reticulum | 52.45 | 32.13 |
| KRH41112 | Soybean | endoplasmic reticulum, golgi | 59.31 | 32.1 |
| Solyc06g072670.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 54.9 | 32.09 |
| CDX83157 | Canola | cytosol | 46.08 | 30.23 |
| KRH59795 | Soybean | extracellular | 43.14 | 27.24 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 30.88 | 25.4 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 41.67 | 24.22 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 41.18 | 24.0 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 41.18 | 23.93 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 41.67 | 23.16 |
| KRH77685 | Soybean | endoplasmic reticulum | 35.29 | 20.28 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 39.71 | 19.95 |
| Os04t0390800-01 | Rice | plastid | 33.82 | 19.11 |
| KRH27806 | Soybean | nucleus | 33.33 | 18.48 |
| KRH00954 | Soybean | endoplasmic reticulum | 23.53 | 15.05 |
| KRH40271 | Soybean | vacuole | 21.57 | 14.01 |
Protein Annotations
| EMBL:ACUP02003342 | EnsemblPlants:KRH59797 | EnsemblPlantsGene:GLYMA_05G203400 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 | ProteinID:KRH59797 | ProteinID:KRH59797.1 |
| SEG:seg | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI00029686B8 | UniProt:K7KS65 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr5:-:38711392..38713746
Molecular Weight (calculated)
23345.4 Da
IEP (calculated)
7.830
GRAVY (calculated)
0.168
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLIHKFLNI VASITTFFFL CLFLPPYWTF KFFLYITNYI FSENVAHLAY EYAKRGACLA LSARRETAVL REVADRTRDC GSPDVIIMRA DVSKVEDCFR
101: LVDETASKAA LVSMYETLRV EVGSDVGITI VTPGYLTVPA WFKVTYLLKL LCPELVEWSF RMMYMTESTR TTAREAPSKK ILDTTGVKKF FYPSSIQSPD
201: VKTE
101: LVDETASKAA LVSMYETLRV EVGSDVGITI VTPGYLTVPA WFKVTYLLKL LCPELVEWSF RMMYMTESTR TTAREAPSKK ILDTTGVKKF FYPSSIQSPD
201: VKTE
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMASKAALV KFFETLRVEI SPDIKITIAL PGFISTDMTT PQFKEMYGSD
201: FILSESVSRC AKAIFRGIGR GEAYVIEPSW IKWIFLIKNV CPEIVDYLLD YIFVSYLKPY FKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMASKAALV KFFETLRVEI SPDIKITIAL PGFISTDMTT PQFKEMYGSD
201: FILSESVSRC AKAIFRGIGR GEAYVIEPSW IKWIFLIKNV CPEIVDYLLD YIFVSYLKPY FKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.