CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028017	Potato	cytosol	31.25	41.18
KRH59797	Soybean	endoplasmic reticulum, extracellular, plasma membrane	38.39	21.08
KRH41112	Soybean	endoplasmic reticulum, golgi	65.18	19.36
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	42.86	19.35
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.89	18.33
CDY16351	Canola	plasma membrane	50.89	18.33
CDX91557	Canola	plasma membrane	45.54	17.83
KRH59795	Soybean	extracellular	50.89	17.65
AT5G50770.1	Thale cress	endoplasmic reticulum	50.0	16.37
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	50.0	15.86
Zm00001d003938_P001	Maize	golgi, vacuole	45.54	14.57
OQU81408	Sorghum	extracellular, golgi, vacuole	45.54	14.53
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	45.54	14.53
HORVU2Hr1G070360.1	Barley	plasma membrane	46.43	14.17
KRH77685	Soybean	endoplasmic reticulum	40.18	12.68
TraesCS2A01G285100.1	Wheat	mitochondrion	44.64	12.32
KRH27806	Soybean	nucleus	39.29	11.96
Os04t0390800-01	Rice	plastid	34.82	10.8
KRH00954	Soybean	endoplasmic reticulum	23.21	8.15
KRH40271	Soybean	vacuole	14.29	5.1
PGSC0003DMT400028018	Potato	plastid	4.46	2.87

Protein Annotations

EMBL:ACUP02003342	EnsemblPlants:KRH59794	EnsemblPlantsGene:GLYMA_05G203200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10	ProteinID:KRH59794	ProteinID:KRH59794.1	SEG:seg
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0006ED5DD2	UniProt:A0A0R0K3H2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr5:-:38688769..38689228

Molecular Weight (calculated)

12512.7 Da

IEP (calculated)

9.708

GRAVY (calculated)

0.529

Length

112 amino acids

Sequence
(BLAST)

001: MLNIVVPPLG LVLLLLMLPP YLLFKILRFI VRSIFSEKVA GKVVLITEAS SGIGEYGRRG ARLALVAKLL GSPDVITIHT DVSIYQDCKP FDSTINYYGF
101: CYRVPSSHWL KN

Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)

001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

Arabidopsis Description

HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.