Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83013 | Canola | endoplasmic reticulum | 21.05 | 51.91 |
| KRH59794 | Soybean | extracellular, plasma membrane | 17.65 | 50.89 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 24.46 | 50.64 |
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 47.68 | 49.84 |
| CDX71662 | Canola | plasma membrane, vacuole | 45.82 | 49.5 |
| Bra041076.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 45.51 | 49.16 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 45.2 | 48.83 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 45.2 | 48.83 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 45.82 | 47.9 |
| CDX90560 | Canola | endoplasmic reticulum | 45.51 | 47.57 |
| Bra033794.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 41.49 | 47.52 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 45.51 | 47.42 |
| Bra012757.1-P | Field mustard | extracellular, golgi | 45.2 | 47.25 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 35.91 | 46.77 |
| AT3G47350.2 | Thale cress | endoplasmic reticulum | 44.27 | 44.55 |
| KRH59797 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 27.24 | 43.14 |
| KRH41112 | Soybean | endoplasmic reticulum, golgi | 49.54 | 42.44 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 45.51 | 41.64 |
| CDX83014 | Canola | mitochondrion | 24.77 | 39.6 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 42.41 | 39.03 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 41.8 | 38.46 |
| KRH77685 | Soybean | endoplasmic reticulum | 41.8 | 38.03 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 40.87 | 37.71 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 42.41 | 37.33 |
| KRH27806 | Soybean | nucleus | 42.11 | 36.96 |
| Os04t0390800-01 | Rice | plastid | 39.01 | 34.9 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 41.18 | 32.76 |
| KRH00954 | Soybean | endoplasmic reticulum | 21.98 | 22.26 |
| KRH40271 | Soybean | vacuole | 17.96 | 18.47 |
Protein Annotations
| EntrezGene:100808990 | Gene3D:3.40.50.720 | MapMan:5.9.4 | EMBL:ACUP02003342 | EMBL:BT097354 | UniProt:C6TI76 |
| EnsemblPlantsGene:GLYMA_05G203300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlants:KRH59795 | ProteinID:KRH59795 |
| ProteinID:KRH59795.1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix |
| UniParc:UPI0001B16A4E | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:38693177..38696970
Molecular Weight (calculated)
35535.9 Da
IEP (calculated)
7.927
GRAVY (calculated)
0.376
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEINKLLNF ALPPLSLIVI FIFTPPLLLV KLLMCVKKFL YTENVAGKVV LITGAASGIG EQVAYEYARR GAKLSLVDIR KDKLVAVADK ARSLGSPDVT
101: IIGADVSKVQ DCNRFVDETV NHFGRLDHLV NNAGISRKSV GVEDWLDVSE FTPIMDINFW GAVYGTLYAI PHLKINKGRI IVIASGCGWF PLPRISIYNA
201: SKAAVINFFE TLRMELGWDI GITIATPGFV KTDLTLRAME FEPTVGRIPM GSACECAIAI VDSACRGDMY VTNPSWVKVL LPWKLLCPEL VDWACCLVFG
301: VSQNSSSMKG NLHVSRIPEL KLE
101: IIGADVSKVQ DCNRFVDETV NHFGRLDHLV NNAGISRKSV GVEDWLDVSE FTPIMDINFW GAVYGTLYAI PHLKINKGRI IVIASGCGWF PLPRISIYNA
201: SKAAVINFFE TLRMELGWDI GITIATPGFV KTDLTLRAME FEPTVGRIPM GSACECAIAI VDSACRGDMY VTNPSWVKVL LPWKLLCPEL VDWACCLVFG
301: VSQNSSSMKG NLHVSRIPEL KLE
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.