CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	99.36	51.84
CDX71662	Canola	plasma membrane, vacuole	98.72	51.51
CDX83013	Canola	endoplasmic reticulum	42.95	51.15
AT5G50690.1	Thale cress	extracellular, plasma membrane	84.62	44.15
AT5G50590.1	Thale cress	extracellular, plasma membrane	84.62	44.15
CDX94277	Canola	mitochondrion	19.23	32.26
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	46.79	29.44
CDY09733	Canola	endoplasmic reticulum, golgi	53.85	27.18
CDX90560	Canola	endoplasmic reticulum	53.85	27.18
CDY21787	Canola	endoplasmic reticulum, golgi	50.0	25.16
KRH59795	Soybean	extracellular	50.64	24.46
CDX91557	Canola	plasma membrane	43.59	23.78
CDY34029	Canola	cytosol	51.28	23.46
CDY16353	Canola	cytosol	51.28	22.92
CDY16351	Canola	plasma membrane	44.87	22.51
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	50.64	22.38
CDY68167	Canola	cytosol	50.0	22.35
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	46.15	20.51
Zm00001d003938_P001	Maize	golgi, vacuole	45.51	20.29
HORVU2Hr1G070360.1	Barley	plasma membrane	46.15	19.62
OQU81408	Sorghum	extracellular, golgi, vacuole	42.95	19.09
CDX83157	Canola	cytosol	35.9	18.01
TraesCS2A01G285100.1	Wheat	mitochondrion	46.79	17.98
Os04t0390800-01	Rice	plastid	41.03	17.73
CDX90742	Canola	cytosol	37.82	13.08
CDY50699	Canola	extracellular, golgi, vacuole	26.92	12.8
CDY05081	Canola	cytosol	37.18	12.72
CDY43128	Canola	extracellular, golgi, vacuole	26.28	12.5
CDY50698	Canola	vacuole	21.79	10.83
CDX83014	Canola	mitochondrion	13.46	10.4
CDY43129	Canola	extracellular, golgi, vacuole	22.44	8.58
CDX75819	Canola	cytosol, nucleus, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY05818	EnsemblPlantsGene:GSBRNA2T00120935001	Gene3D:3.40.50.720	GO:A0A078F1U0	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43391	PANTHER:PTHR43391:SF10	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDY05818	ProteinID:CDY05818.1
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0004EE90E2	MapMan:5.9.4	:	:

Description

BnaA10g06020D

Coordinates

chrLK031965:+:299581..300248

Molecular Weight (calculated)

17508.5 Da

IEP (calculated)

8.713

GRAVY (calculated)

0.319

Length

156 amino acids

Sequence
(BLAST)

001: MALINKILNI FLPIVTFSLL VVFMPISILF SLFGFIRNSK ESDKVNGKVV IITGSSSGIG EHLAYEYARR GAYLTLVARR EDRLQLVANR CRRLGSPDVA
101: VVRGDVSVIE DCKRFIEETI SRFGRLDHLV NNAGIAEAKF FEDYLQISDV LPIMVN

Best Arabidopsis Sequence Match ( AT5G50690.2 )
(BLAST)

001: MDLNNKIFNI LLPIVTVSFL LVFMPFSIFF KLLQFIRGCK ESEKVNGKVV IITGSSSGIG EHLAYEYARR GAYLTLVARR EDRLQVVADR CRKLGSPDVA
101: VVRGDVSVIK DCKRFVQETI SRFGRLDHLV NNAGIAEAKF FEDYSEISDV LPIVNTNFWG PVYATHFAIP HLKKTKGKII AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELHPEVG VTIVFPGLIE NGNTNPDLLA EVFYYHHFSF

Arabidopsis Description

HSD711-beta-hydroxysteroid dehydrogenase-like 4A [Source:UniProtKB/Swiss-Prot;Acc:P0DKC7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.