Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
21803444
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000697.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 98.45 | 99.33 |
| CDY05081 | Canola | cytosol | 97.56 | 96.49 |
| AT4G10020.1 | Thale cress | endoplasmic reticulum | 78.94 | 91.52 |
| Solyc06g064650.2.1 | Tomato | endoplasmic reticulum | 52.55 | 73.6 |
| VIT_18s0001g06750.t01 | Wine grape | endoplasmic reticulum | 54.1 | 68.93 |
| KRH77685 | Soybean | endoplasmic reticulum | 52.11 | 66.2 |
| KRH27806 | Soybean | nucleus | 50.78 | 62.23 |
| GSMUA_Achr7P02980_001 | Banana | endoplasmic reticulum, golgi | 47.67 | 62.14 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 48.78 | 61.45 |
| Os03t0842900-01 | Rice | plastid | 45.45 | 57.75 |
| KXG37163 | Sorghum | endoplasmic reticulum | 47.23 | 55.91 |
| Zm00001d034801_P001 | Maize | peroxisome | 29.49 | 51.35 |
| HORVU5Hr1G120110.2 | Barley | endoplasmic reticulum, vacuole | 42.35 | 50.66 |
| TraesCS5D01G529200.1 | Wheat | endoplasmic reticulum, vacuole | 43.02 | 50.13 |
| TraesCS4A01G343700.1 | Wheat | endoplasmic reticulum, vacuole | 43.24 | 50.13 |
| CDX94277 | Canola | mitochondrion | 10.2 | 49.46 |
| TraesCS5B01G530500.1 | Wheat | endoplasmic reticulum | 42.13 | 49.1 |
| CDY34029 | Canola | cytosol | 30.6 | 40.47 |
| CDX83013 | Canola | endoplasmic reticulum | 11.75 | 40.46 |
| CDY68167 | Canola | cytosol | 31.26 | 40.4 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 27.49 | 40.13 |
| CDY16353 | Canola | cytosol | 31.04 | 40.11 |
| CDX90560 | Canola | endoplasmic reticulum | 27.27 | 39.81 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 27.27 | 39.68 |
| CDY16351 | Canola | plasma membrane | 26.61 | 38.59 |
| CDX91557 | Canola | plasma membrane | 24.39 | 38.46 |
| CDX71662 | Canola | plasma membrane, vacuole | 25.28 | 38.13 |
| CDX83157 | Canola | cytosol | 26.16 | 37.94 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 13.08 | 37.82 |
| CDX83014 | Canola | mitochondrion | 14.86 | 33.17 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 15.74 | 21.65 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 15.74 | 21.65 |
| CDY50698 | Canola | vacuole | 14.86 | 21.34 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 16.19 | 17.89 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 2.44 | 16.67 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:A0A078DP32 | EnsemblPlants:CDX90742 | ProteinID:CDX90742 | ProteinID:CDX90742.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00151434001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 |
| PRINTS:PR01217 | ScanProsite:PS00061 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF14 | InterPro:SDR_fam | SUPFAM:SSF51735 |
| InterPro:Sc_DH/Rdtase_CS | UniParc:UPI0004EDE447 | SEG:seg | : | : | : |
Description
BnaA03g24220D
Coordinates
chrLK031864:+:281610..283904
Molecular Weight (calculated)
50620.1 Da
IEP (calculated)
7.375
GRAVY (calculated)
-0.297
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDLLNSVMN LVAPPATMVV MAFSWPLLCF ISFSERLYNS YFVTEDMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NNARQIGANH
101: VIIIAADVVK EDDCRRFITQ AVNYYGRVDH LVNSASLGHT FYFDEVSDTT VFPHLLDINF WGNVYPTYVA LPHLQKTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSRGKF MLEEGAEMQW KEEREVSANG GPLEDFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS SEGSRQSSLV GVGQGMPVEE SSSQMKLMLE GGSPRVPPRV SASPPHYTAS PPRYTPSPSP PHHTSSPQRY TPSPSPPHYT SSRQRYTPSP
401: SPPRYTESPP LYTESPPHYT TSPNWYAESP PRYTPSPSPP RFSRFNIQEL P
101: VIIIAADVVK EDDCRRFITQ AVNYYGRVDH LVNSASLGHT FYFDEVSDTT VFPHLLDINF WGNVYPTYVA LPHLQKTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSRGKF MLEEGAEMQW KEEREVSANG GPLEDFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS SEGSRQSSLV GVGQGMPVEE SSSQMKLMLE GGSPRVPPRV SASPPHYTAS PPRYTPSPSP PHHTSSPQRY TPSPSPPHYT SSRQRYTPSP
401: SPPRYTESPP LYTESPPHYT TSPNWYAESP PRYTPSPSPP RFSRFNIQEL P
001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL
Arabidopsis Description
HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.