Factsheet for TraesCS4A01G343700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	96.14	96.64
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	94.6	95.09
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	91.52	94.43
Os03t0842900-01	Rice	plastid	70.18	76.9
KXG37163	Sorghum	endoplasmic reticulum	71.47	72.97
Zm00001d034801_P001	Maize	peroxisome	45.5	68.34
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	53.98	60.69
GSMUA_AchrUn_...	Banana	extracellular, golgi	55.78	60.61
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	53.73	59.04
Solyc06g064650.2.1	Tomato	endoplasmic reticulum	48.07	58.07
KRH77685	Soybean	endoplasmic reticulum	51.41	56.34
KRH27806	Soybean	nucleus	50.64	53.53
AT4G10020.1	Thale cress	endoplasmic reticulum	51.41	51.41
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	50.64	44.07
CDX90742	Canola	cytosol	50.13	43.24
CDY05081	Canola	cytosol	50.39	42.98
TraesCS2A01G285000.1	Wheat	cytosol, golgi, peroxisome, plastid	35.99	38.04
TraesCS5A01G054900.1	Wheat	golgi, vacuole	32.65	37.69
TraesCS4A01G319700.2	Wheat	extracellular, golgi	32.13	37.31
TraesCS2A01G285100.1	Wheat	mitochondrion	33.42	32.02
TraesCS4A01G232000.1	Wheat	vacuole	18.51	22.02

Protein Annotations

EnsemblPlants:TraesCS4A01G343700.1	EnsemblPlantsGene:TraesCS4A01G343700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR43391
PANTHER:PTHR43391:SF14	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	SEG:seg	SUPFAM:SSF51735
TMHMM:TMhelix	MapMan:5.9.4	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:623384786..623386410

Molecular Weight (calculated)

41796.2 Da

IEP (calculated)

6.727

GRAVY (calculated)

0.127

Length

389 amino acids

Sequence
(BLAST)

001: MERVLTALMD LVVPPASMVM LAFAWPTLAF LRALEWAVKA LTKEDMRGKV VLITGASSAI GEQVAYEYAR RGANLVLVAR REHRLFAVRE NARALGAGQV
101: LVVAADVVRE DDCGRLVADT ISYFGQLDHL VNTVSLGHDF LFEEAGDTAA FPHLMDINFW GNVYPTYAAL PYLRQSHGRV VVNASVDTWL PMPRMSLYSA
201: AKAAVVDFYE TLRYEVKDEV GITVATHGWI GGEPGVGTGI GTSRFALEEG AGAADQTQAQ AQAPAQQWTK ADTTPPLPAP GGLAVEEYAR AVVDGACRGD
301: ARVRRPGWYD VFHVFRAFAP DVLGWTFRLL LSTAPAPSTV AGTGRRALVV APVGAPTAAL PAPPVRPLIE YPAAVAGRRP AAAQLHKLE

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.