Factsheet for TraesCS4A01G232000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G081900.1	Wheat	vacuole	97.25	97.25
TraesCS4B01G084000.1	Wheat	vacuole	97.25	97.25
Os11t0265400-01	Rice	plasma membrane	85.63	85.37
KXG28278	Sorghum	endoplasmic reticulum	82.26	81.27
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	80.73	73.95
HORVU4Hr1G014360.2	Barley	mitochondrion	84.4	70.95
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	67.89	69.81
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	74.01	67.22
KRH00954	Soybean	endoplasmic reticulum	65.14	66.77
AT3G03330.1	Thale cress	golgi	66.36	66.16
CDY43128	Canola	extracellular, golgi, vacuole	65.14	64.94
CDY50699	Canola	extracellular, golgi, vacuole	64.83	64.63
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	64.53	64.33
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	62.39	64.15
CDX75819	Canola	cytosol, nucleus, plasma membrane	12.84	63.64
KRH40271	Soybean	vacuole	57.19	59.55
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	34.25	59.26
CDY50698	Canola	vacuole	55.96	58.28
CDY43129	Canola	extracellular, golgi, vacuole	58.1	46.57
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	48.01	43.85
AT3G03350.2	Thale cress	vacuole	32.11	28.07
TraesCS4A01G319700.2	Wheat	extracellular, golgi	24.77	24.18
TraesCS2A01G285000.1	Wheat	cytosol, golgi, peroxisome, plastid	26.61	23.64
TraesCS5A01G054900.1	Wheat	golgi, vacuole	21.71	21.07
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	22.02	18.51
TraesCS2A01G285100.1	Wheat	mitochondrion	21.41	17.24

Protein Annotations

EnsemblPlants:TraesCS4A01G232000.1	EnsemblPlantsGene:TraesCS4A01G232000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR45274
PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	SEG:seg	SMART:SM00822	SUPFAM:SSF51735
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:541672086..541679832

Molecular Weight (calculated)

35296.9 Da

IEP (calculated)

9.509

GRAVY (calculated)

0.048

Length

327 amino acids

Sequence
(BLAST)

001: MLLPFALLAG AAAGAFLLFK FATADGDFTL LSCGRARRDK VEGKVVWITG ASRGIGEVLS MQFASLGAKL ILSARNKEEL ERVKRNIMSK HPDSKIEVLP
101: MDLSSDEESL KEVVHSAESL FSSAGIDYMM HNAAFERPKR GALEETEEGL KATFHVNVFG TITLTRLLAP FMLDRGMGHF VVMSSAAGKV PTPGQALYSA
201: SKHALNGYFA SLRSELCTKG IKVTVVCPGP IETPVSSGAT SSSQRHSSEK RVSVERCAEL TIVAATHGLK EAWISYQPVL AVMYVVQYMP TIGCWIMDKV
301: GAKRVDAAAK KGNAYSWNLL FGGKKSA

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.