Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00954 | Soybean | endoplasmic reticulum | 78.3 | 78.06 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 73.9 | 73.9 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 43.08 | 72.49 |
| Bra031995.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 71.38 | 69.21 |
| KRH40271 | Soybean | vacuole | 67.92 | 68.79 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 70.75 | 68.6 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 70.75 | 68.6 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 70.44 | 68.5 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 70.13 | 68.2 |
| AT3G03330.1 | Thale cress | golgi | 70.13 | 67.99 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 69.81 | 67.89 |
| KXG28278 | Sorghum | endoplasmic reticulum | 70.13 | 67.37 |
| Os11t0265400-01 | Rice | plasma membrane | 68.87 | 66.77 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 13.84 | 66.67 |
| CDY50698 | Canola | vacuole | 61.95 | 62.74 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 70.13 | 61.94 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 68.24 | 60.78 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 65.41 | 50.98 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 61.95 | 50.64 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.89 | 46.09 |
| VIT_16s0039g01600.t01 | Wine grape | extracellular, nucleus, peroxisome, plastid | 10.38 | 28.21 |
| AT3G03350.2 | Thale cress | vacuole | 33.02 | 28.07 |
| VIT_17s0000g01040.t01 | Wine grape | endoplasmic reticulum | 11.95 | 23.46 |
| VIT_01s0146g00070.t01 | Wine grape | cytosol | 20.44 | 23.3 |
| VIT_18s0001g06750.t01 | Wine grape | endoplasmic reticulum | 23.27 | 20.9 |
| VIT_17s0000g01030.t01 | Wine grape | endoplasmic reticulum, extracellular | 3.14 | 20.41 |
| VIT_01s0146g00090.t01 | Wine grape | golgi | 21.07 | 20.24 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 20.44 | 20.19 |
Protein Annotations
| EntrezGene:100247868 | wikigene:100247868 | Gene3D:3.40.50.720 | MapMan:35.1 | EMBL:AM486963 | ProteinID:CAN68791 |
| ProteinID:CAN68791.1 | ProteinID:CBI17601 | ProteinID:CBI17601.3 | UniProt:D7SPM2 | EMBL:FN594959 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EntrezGene:LOC100247868 |
| wikigene:LOC100247868 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR45274 |
| InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | SignalP:SignalP-noTM | TIGR:TC60869 |
| UniParc:UPI0001982FED | ArrayExpress:VIT_04s0023g00860 | EnsemblPlantsGene:VIT_04s0023g00860 | EnsemblPlants:VIT_04s0023g00860.t01 | unigene:Vvi.3983 | RefSeq:XP_002276273 |
| RefSeq:XP_002276273.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:17272094..17283854
Molecular Weight (calculated)
34445.0 Da
IEP (calculated)
9.739
GRAVY (calculated)
0.058
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIISILFLA FTATLLFRFA TADGDFTLLS KRHPKRQEIE DKVVWITGAS RGIGEVLAKQ LAGLGAKLIL SARNEVELER VKQQLRGKHA PGEVEILPLD
101: LAGGEDSLRE AVEKAESFFS GAGVDYMIHN AAYERPKASA VDVTEESLKA TLNVNVIGTI SLTQLLAPFM LKRGRGHFVV MSSAAGKTPA PGQAVYSASK
201: YALNGYFHTL RSELCQKGIK VTVVCPGPIE TSNGSKASTE RRVSSERCAE LTIIAATHGL KEVWISCQPV LAVMYLVQYM PTIGFWLMDK VGANRVEAAK
301: QKGSTYSLGL LFGKKKAA
101: LAGGEDSLRE AVEKAESFFS GAGVDYMIHN AAYERPKASA VDVTEESLKA TLNVNVIGTI SLTQLLAPFM LKRGRGHFVV MSSAAGKTPA PGQAVYSASK
201: YALNGYFHTL RSELCQKGIK VTVVCPGPIE TSNGSKASTE RRVSSERCAE LTIIAATHGL KEVWISCQPV LAVMYLVQYM PTIGFWLMDK VGANRVEAAK
301: QKGSTYSLGL LFGKKKAA
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Arabidopsis Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.