Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G084000.1 | Wheat | vacuole | 98.17 | 98.17 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 97.25 | 97.25 |
| Os11t0265400-01 | Rice | plasma membrane | 86.54 | 86.28 |
| KXG28278 | Sorghum | endoplasmic reticulum | 83.79 | 82.78 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 81.35 | 74.51 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 84.71 | 71.21 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 68.5 | 70.44 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 74.62 | 67.78 |
| KRH00954 | Soybean | endoplasmic reticulum | 65.75 | 67.4 |
| AT3G03330.1 | Thale cress | golgi | 66.97 | 66.77 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 13.46 | 66.67 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 65.44 | 65.24 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 64.83 | 64.63 |
| Bra031995.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 64.83 | 64.63 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 62.69 | 64.47 |
| KRH40271 | Soybean | vacuole | 57.8 | 60.19 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 34.56 | 59.79 |
| CDY50698 | Canola | vacuole | 56.57 | 58.92 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 58.41 | 46.81 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 48.62 | 44.41 |
| AT3G03350.2 | Thale cress | vacuole | 32.42 | 28.34 |
| TraesCS2D01G283900.1 | Wheat | plastid | 27.22 | 24.18 |
| TraesCS5D01G565600.1 | Wheat | extracellular, plasma membrane | 25.69 | 24.07 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 22.94 | 21.37 |
| TraesCS5D01G066100.1 | Wheat | golgi, vacuole | 21.41 | 19.94 |
| TraesCS5D01G529200.1 | Wheat | endoplasmic reticulum, vacuole | 22.32 | 18.86 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G081900.1 | EnsemblPlantsGene:TraesCS4D01G081900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR45274 |
| PFAM:PF00106 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg | SMART:SM00822 | SUPFAM:SSF51735 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:55357503..55362669
Molecular Weight (calculated)
35306.9 Da
IEP (calculated)
9.509
GRAVY (calculated)
0.068
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLFALLAG AAAAAFLVFK FATADGDFTL LSCGRPRRDK VDGKVVWITG ASRGIGEVLS MQFASLGAKL ILSARNKEEL ERVKRNIISK HPDSKVEVLP
101: MDLSSDEESL KEVVHSAESL FSSAGIDYMM HNAAFERPKR GALEETEEGL KATFHVNVFG TITLTRLLAP FMLDRGMGHF VVMSSAAGKV PTPGQALYSA
201: SKHALNGYFA SLRSELCTKG IKVTVVCPGP IETPVSSGAT SSSQRHSSEK RVSVERCAEL TIIAATHGLK EAWISYQPVL AVMYVVQYMP TIGCWLMDKV
301: GAKRVDAAAK KGNAYSWNLL FGGKKSA
101: MDLSSDEESL KEVVHSAESL FSSAGIDYMM HNAAFERPKR GALEETEEGL KATFHVNVFG TITLTRLLAP FMLDRGMGHF VVMSSAAGKV PTPGQALYSA
201: SKHALNGYFA SLRSELCTKG IKVTVVCPGP IETPVSSGAT SSSQRHSSEK RVSVERCAEL TIIAATHGLK EAWISYQPVL AVMYVVQYMP TIGCWLMDKV
301: GAKRVDAAAK KGNAYSWNLL FGGKKSA
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Arabidopsis Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.