Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 7
- extracellular 6
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43128 | Canola | extracellular, golgi, vacuole | 91.16 | 91.16 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 90.24 | 90.24 |
| Bra031995.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 90.24 | 90.24 |
| CDY50698 | Canola | vacuole | 75.91 | 79.3 |
| KRH00954 | Soybean | endoplasmic reticulum | 68.29 | 70.22 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 67.99 | 70.13 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 65.55 | 67.61 |
| Os11t0265400-01 | Rice | plasma membrane | 67.07 | 67.07 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 66.77 | 66.97 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 66.77 | 66.97 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 66.16 | 66.36 |
| KXG28278 | Sorghum | endoplasmic reticulum | 65.85 | 65.26 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 80.49 | 64.71 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 36.28 | 62.96 |
| KRH40271 | Soybean | vacuole | 58.23 | 60.83 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 66.46 | 60.56 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 65.24 | 59.94 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 62.8 | 57.54 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 58.54 | 49.36 |
| AT3G03350.2 | Thale cress | vacuole | 42.07 | 36.9 |
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 24.7 | 26.21 |
| AT3G47350.2 | Thale cress | endoplasmic reticulum | 25.61 | 26.17 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 23.17 | 25.42 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 23.17 | 25.42 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 25.61 | 24.07 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 25.61 | 24.07 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 23.78 | 22.81 |
| AT4G10020.1 | Thale cress | endoplasmic reticulum | 21.34 | 17.99 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:821281 | UniProt:A0A178V8F2 | ProteinID:AEE73930.1 | ArrayExpress:AT3G03330 |
| EnsemblPlantsGene:AT3G03330 | RefSeq:AT3G03330 | TAIR:AT3G03330 | RefSeq:AT3G03330-TAIR-G | EnsemblPlants:AT3G03330.1 | TAIR:AT3G03330.1 |
| EMBL:AY127020 | EMBL:BT000550 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_186983.2 | ProteinID:OAP02570.1 |
| PFAM:PF00106 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000282 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR45274 | UniProt:Q8L7U0 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI00000AC1B7 | SEG:seg | : | : |
Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
Coordinates
chr3:-:783332..786209
Molecular Weight (calculated)
35790.5 Da
IEP (calculated)
9.794
GRAVY (calculated)
0.015
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.