Factsheet for HORVU4Hr1G014360.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G084000.1	Wheat	vacuole	71.47	85.02
TraesCS4D01G081900.1	Wheat	vacuole	71.21	84.71
TraesCS4A01G232000.1	Wheat	vacuole	70.95	84.4
Os11t0265400-01	Rice	plasma membrane	65.04	77.13
KXG28278	Sorghum	endoplasmic reticulum	62.98	74.02
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	61.18	66.67
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	57.58	62.22
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	50.64	61.95
KRH00954	Soybean	endoplasmic reticulum	49.61	60.5
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	29.31	60.32
AT3G03330.1	Thale cress	golgi	49.36	58.54
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	47.04	57.55
CDY43128	Canola	extracellular, golgi, vacuole	48.07	57.01
CDY50699	Canola	extracellular, golgi, vacuole	47.56	56.4
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.56	56.4
KRH40271	Soybean	vacuole	43.44	53.82
CDY50698	Canola	vacuole	42.16	52.23
CDX75819	Canola	cytosol, nucleus, plasma membrane	7.71	45.45
CDY43129	Canola	extracellular, golgi, vacuole	43.96	41.91
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	36.25	39.39
AT3G03350.2	Thale cress	vacuole	26.74	27.81
HORVU2Hr1G070310.3	Barley	plastid	19.79	20.81
HORVU2Hr1G070360.1	Barley	plasma membrane	18.25	19.35
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	17.99	18.57
HORVU5Hr1G013510.1	Barley	golgi	16.71	16.05

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A287NB20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G014360	EnsemblPlants:HORVU4Hr1G014360.2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR45274	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix
UniParc:UPI000B481B24	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:52512861..52520700

Molecular Weight (calculated)

42965.9 Da

IEP (calculated)

10.126

GRAVY (calculated)

-0.206

Length

389 amino acids

Sequence
(BLAST)

001: LRRSLSLALT SKERENAPTI QRTRRHRGPR TTRQPRMLLL LAFLAAAGAA AFFLFKFVTA DGDFTLLSCG RPRRDKVDGK VVWITGASRG IGEVLSMQFA
101: SLGAKLILSA RNKEELERVK HNIMSKHPDS KVEVLPMDLS SDEKSLKEVV HSAESLFSSA GIDYMMHNAA FERPKRGALE ETEEGLKATF KVNVFGTITL
201: TRLLAPFMLD RGMGHFVVMS SAAGKVPTPG QALYSASKHA LNGYFASLRS ELCTKGIKVT VVCPGPIETP ESSGATSSSQ RHSSEKRVSV ERCAELTIVA
301: ATHGLKEAWI SYQSLCWLLC TWCNTCQQLD AGLWIRLVRS ELMPLQRKAT PTAGISSSVA KSRLDDEVAH YTYSWNLQDA RGRWRCTSK

Best Arabidopsis Sequence Match ( AT3G03350.1 )
(BLAST)

001: MFLVLHYLTN QTNSDSYLGG HTGITTPLRP PPPRKTYCSK SSSSPPPPKY MYVTGVPGEL YRTEPDDQWG YNSSVNRNLV YLVLKLELNF RDQRNKLTQE
101: VSSAFSGKLN ILNNLRTILP HFYQLRLPAP EEIASLVAFL CLPAASYTTR QEELKACLND CKSSGLVVSG SKSKASDASE ETINTTFDIN VFGTITLIKL
201: VTPHMLKQGG GHFVVISSAA GKVPSPGQAI YSASKHALHG YFHSLRSEFC QEGIKVTVVI PGPIETLNGT GTSTSEDKKS HEKRVSSE

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J128]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.