Factsheet for HORVU5Hr1G013510.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G061600.1	Wheat	golgi, vacuole	82.96	96.0
TraesCS5A01G054900.1	Wheat	golgi, vacuole	79.26	95.25
TraesCS5D01G066100.1	Wheat	golgi, vacuole	82.22	94.87
Os11t0499600-01	Rice	endoplasmic reticulum, golgi	74.32	85.03
EES08518	Sorghum	golgi, vacuole	73.33	83.43
Zm00001d007345_P001	Maize	golgi, vacuole	73.09	82.45
Zm00001d049161_P001	Maize	golgi, vacuole	71.6	81.23
GSMUA_Achr6P12220_001	Banana	endoplasmic reticulum, plasma membrane	50.62	57.91
HORVU2Hr1G070360.1	Barley	plasma membrane	37.04	40.87
HORVU2Hr1G070310.3	Barley	plastid	33.58	36.76
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	30.37	32.63
HORVU4Hr1G014360.2	Barley	mitochondrion	16.05	16.71

Protein Annotations

EnsemblPlants:HORVU5Hr1G013510.1	EnsemblPlantsGene:HORVU5Hr1G013510	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43391	PANTHER:PTHR43391:SF20	PFAM:PF00106	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000B481D57	UniProt:A0A287QEG3	MapMan:5.9.4	:

Description

No Description!

Coordinates

chrchr5H:-:44207039..44210663

Molecular Weight (calculated)

44133.5 Da

IEP (calculated)

9.496

GRAVY (calculated)

0.165

Length

405 amino acids

Sequence
(BLAST)

001: MARQALTNGF LSGFMHVGLA LVLLAYLPVA FLCRLVYRLL VRPFAAGEDL RGKVVLITGA SSGIGEHLAY EYARKGACVA LVARTEIALR AVAKTARELG
101: SPDTLVVPAD ITDVEEARRA VEETVAHFGK LNHLVANAGV WSSCFFEEIT NISAFQNVMD LNFWGAVYPT YFALPYLKAS RGNIVVTASV AGRVPVARMS
201: FYNVRATTLI DPDSNLITAM NSGSGGSSPP NIFTDRYGEL TLRSVGRCTV RVIALQASKG AVIRFFETLR AELGPHVRVT ILVPGYVVSN LTMGKGVQKD
301: GNVGFDEDAR DINVGPLPVG KTETLAEVVV ASVRRGDRYV TWPGWYWPFH MVMCAAPELV DWFSRAFYVS KSSDKDGDAL SKKILMAVGG KKFLYPKNIR
401: SHQSQ

Best Arabidopsis Sequence Match ( AT3G47350.1 )
(BLAST)

001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD

Arabidopsis Description

ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.