Factsheet for TraesCS5A01G054900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G061600.1	Wheat	golgi, vacuole	97.63	94.0
TraesCS5D01G066100.1	Wheat	golgi, vacuole	96.44	92.59
Os11t0499600-01	Rice	endoplasmic reticulum, golgi	85.16	81.07
EES08518	Sorghum	golgi, vacuole	85.46	80.9
Zm00001d007345_P001	Maize	golgi, vacuole	84.57	79.39
HORVU5Hr1G013510.1	Barley	golgi	95.25	79.26
Zm00001d049161_P001	Maize	golgi, vacuole	82.79	78.15
GSMUA_Achr6P12220_001	Banana	endoplasmic reticulum, plasma membrane	58.16	55.37
TraesCS4A01G319700.2	Wheat	extracellular, golgi	43.03	43.28
TraesCS2A01G285000.1	Wheat	cytosol, golgi, peroxisome, plastid	44.81	41.03
TraesCS2A01G285100.1	Wheat	mitochondrion	42.73	35.47
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	37.69	32.65
TraesCS4A01G232000.1	Wheat	vacuole	21.07	21.71

Protein Annotations

EnsemblPlants:TraesCS5A01G054900.1	EnsemblPlantsGene:TraesCS5A01G054900	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR43391
PANTHER:PTHR43391:SF20	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	SEG:seg
SUPFAM:SSF51735	TMHMM:TMhelix	MapMan:5.9.4	:	:	:

Description

No Description!

Coordinates

chr5A:+:51671576..51674643

Molecular Weight (calculated)

36787.6 Da

IEP (calculated)

8.641

GRAVY (calculated)

0.203

Length

337 amino acids

Sequence
(BLAST)

001: MYVGLALVLL AYLPVAFLCR LVYRLLIRPF AAGEDLRGKV VLITGASSGI GEHLAYEYAR KGACVALVAR TEIALRAVAK TARELGAPDT LVVPADITDV
101: DEAKRAVEET LAHFGKLNHL VANAGVWSSC FFEEITNVSA FQNVMDLNFW GAVYPTYFAL PYLKASRGNI VVTASVAGRV PVARMSFYNA SKAAVIRFYE
201: TLRAELGPHV RVTILMPGYV VSNLTMGKGV QKDGNVGFDE DARDINVGPL PVGRTETLAE VVVASVRRGD SYVTWPGWYW PFHMVMCAAP ELVDCFSRAF
301: YVSKSSDKDG DALSKKILMA VGGDKFYPKN IRSSQPQ

Best Arabidopsis Sequence Match ( AT3G47350.1 )
(BLAST)

001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD

Arabidopsis Description

ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.