Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G054900.1 | Wheat | golgi, vacuole | 94.0 | 97.63 |
| TraesCS5D01G066100.1 | Wheat | golgi, vacuole | 96.86 | 96.58 |
| Os11t0499600-01 | Rice | endoplasmic reticulum, golgi | 84.86 | 83.9 |
| HORVU5Hr1G013510.1 | Barley | golgi | 96.0 | 82.96 |
| EES08518 | Sorghum | golgi, vacuole | 84.0 | 82.58 |
| Zm00001d007345_P001 | Maize | golgi, vacuole | 83.43 | 81.34 |
| Zm00001d049161_P001 | Maize | golgi, vacuole | 82.0 | 80.39 |
| GSMUA_Achr6P12220_001 | Banana | endoplasmic reticulum, plasma membrane | 58.29 | 57.63 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 32.86 | 46.37 |
| TraesCS5B01G559400.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 42.86 | 42.98 |
| TraesCS2B01G302100.1 | Wheat | cytosol, golgi, peroxisome, plastid | 43.14 | 41.03 |
| TraesCS5B01G530500.1 | Wheat | endoplasmic reticulum | 36.0 | 32.56 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 20.29 | 21.71 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G061600.1 | EnsemblPlantsGene:TraesCS5B01G061600 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF20 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TMHMM:TMhelix | MapMan:5.9.4 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:68926805..68930382
Molecular Weight (calculated)
38238.5 Da
IEP (calculated)
9.485
GRAVY (calculated)
0.199
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MARQALTNGF LSGFMHVGLA LVLLAYLPVA FLCRLVYRLL IRPFAAGEDL RGKVVLITGA SSGIGEHLAY EYARKGACVA LVARTEIALR AVAKTARELG
101: APDTLVVPAD ITNVEEAKRA VEETLAHFGK LNHLVANAGV WSSCFFEEIT NVSAFQNVMD LNFWGAVYPT YFALPYLKAS RGNIVVTASV AGRVPVARMS
201: FYNASKAAVI RFYETLRAEL GPHVRVTILM PGYVVSNLTM GKGVQKDGNV GFDEARDINV GPLPVGKTET LAEVVVASVR RGDSYVTWPG WYWPFHMVMC
301: AAPELVDWFS RAFYVSKSSD KDGDTLSKKI LMAVGGNKFY PKNIRSSQPQ
101: APDTLVVPAD ITNVEEAKRA VEETLAHFGK LNHLVANAGV WSSCFFEEIT NVSAFQNVMD LNFWGAVYPT YFALPYLKAS RGNIVVTASV AGRVPVARMS
201: FYNASKAAVI RFYETLRAEL GPHVRVTILM PGYVVSNLTM GKGVQKDGNV GFDEARDINV GPLPVGKTET LAEVVVASVR RGDSYVTWPG WYWPFHMVMC
301: AAPELVDWFS RAFYVSKSSD KDGDTLSKKI LMAVGGNKFY PKNIRSSQPQ
001: MDILTTILNL LLPPLTIIFL FLFYPFYLLI KLVLCLRKNL HFENVARKVV LITGASSGIG EHVAYEYAKK GAYLALVARR RDRLEIVAET SRQLGSGNVI
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD
Arabidopsis Description
HSD311-beta-hydroxysteroid dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STY7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.