Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G285000.1 | Wheat | cytosol, golgi, peroxisome, plastid | 95.38 | 95.38 |
| TraesCS2D01G283900.1 | Wheat | plastid | 94.84 | 94.84 |
| Os04t0390700-01 | Rice | plastid | 79.62 | 79.62 |
| HORVU2Hr1G070310.3 | Barley | plastid | 73.64 | 73.24 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 38.04 | 56.45 |
| TraesCS5B01G559400.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.36 | 54.15 |
| TraesCS5B01G061600.1 | Wheat | golgi, vacuole | 41.03 | 43.14 |
| TraesCS5B01G530500.1 | Wheat | endoplasmic reticulum | 37.23 | 35.4 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 23.1 | 25.99 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G302100.1 | EnsemblPlantsGene:TraesCS2B01G302100 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF29 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:5.9.4 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:425437224..425438941
Molecular Weight (calculated)
40341.9 Da
IEP (calculated)
9.503
GRAVY (calculated)
0.021
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMLSMLKVG YTVLRSETPA TDLVNTFMDW AARRSLLLLA LFMPPYYVYK LTASAAATVA PQDVAGKVVL VTGVSSGIGE QIAYQYAKKG ARLALVARRE
101: GSLREVAAKA TDLGSPDVLV VPGDVARPED CKAFVQATVE CFGRLDHLVN NAGLVNVCWF EEMPDVATFK QVLDVNFWGT VHPTHAALPH LTRSRGKIFV
201: NSSAAAVLAM PRMSFYNASK AAVLSFADTL RMELGDEVGV TVATPGWIES EMTKGKHLSK GGRIEVDQDT RDAQVGLFPV VRAERCAEAI VDAVCRGRRS
301: VTVPLWYRAL FLWRSLAPEV GDVLQRVFYR RSSGDGGRQM RARRVLEVTG AKRVLQPPSL HTSDIKRE
101: GSLREVAAKA TDLGSPDVLV VPGDVARPED CKAFVQATVE CFGRLDHLVN NAGLVNVCWF EEMPDVATFK QVLDVNFWGT VHPTHAALPH LTRSRGKIFV
201: NSSAAAVLAM PRMSFYNASK AAVLSFADTL RMELGDEVGV TVATPGWIES EMTKGKHLSK GGRIEVDQDT RDAQVGLFPV VRAERCAEAI VDAVCRGRRS
301: VTVPLWYRAL FLWRSLAPEV GDVLQRVFYR RSSGDGGRQM RARRVLEVTG AKRVLQPPSL HTSDIKRE
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.