Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G285000.1 | Wheat | cytosol, golgi, peroxisome, plastid | 96.74 | 96.74 |
| TraesCS2B01G302100.1 | Wheat | cytosol, golgi, peroxisome, plastid | 94.84 | 94.84 |
| Os04t0390700-01 | Rice | plastid | 79.89 | 79.89 |
| HORVU2Hr1G070310.3 | Barley | plastid | 75.82 | 75.41 |
| TraesCS5D01G565600.1 | Wheat | extracellular, plasma membrane | 51.36 | 54.15 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 45.38 | 47.58 |
| TraesCS5D01G066100.1 | Wheat | golgi, vacuole | 41.58 | 43.59 |
| TraesCS5D01G529200.1 | Wheat | endoplasmic reticulum, vacuole | 37.23 | 35.4 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 24.18 | 27.22 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G283900.1 | EnsemblPlantsGene:TraesCS2D01G283900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF29 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:5.9.4 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:357976038..357977727
Molecular Weight (calculated)
40339.9 Da
IEP (calculated)
9.808
GRAVY (calculated)
-0.014
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMLSMLKVG YTVLRSETPA TDLVNTFMDW AARRSLLLLA LFMPPYHVYK LAASAAATVA PEDVAGKVVL ITGASSGIGE QIAYQYAKKG ARLALVARRE
101: GSLREVAAKA TDLGSPDVLV VPGDVARPED CKAFVQATVE RFGRLDHLVN NAGLANVCWF EEVPDVAGFK QILDVNFWGT VHPTHAALPH LKRSRGKIFV
201: NSSAAAVLAM PRMSFYNASK AAVLSFAETL RMELGDEMGV TVATPGWIES EMTKGKHLSK GGRVEVDQDT RNAQVRLFPV VRAERCAEAI VDAVCRGRRS
301: VTVPLWYRGL FLWRSLAPEV GDVLQRVFYR RSSGDGGSQM RARRVLEVTG AKRVLQPPSL HTSDIKWE
101: GSLREVAAKA TDLGSPDVLV VPGDVARPED CKAFVQATVE RFGRLDHLVN NAGLANVCWF EEVPDVAGFK QILDVNFWGT VHPTHAALPH LKRSRGKIFV
201: NSSAAAVLAM PRMSFYNASK AAVLSFAETL RMELGDEMGV TVATPGWIES EMTKGKHLSK GGRVEVDQDT RNAQVRLFPV VRAERCAEAI VDAVCRGRRS
301: VTVPLWYRGL FLWRSLAPEV GDVLQRVFYR RSSGDGGSQM RARRVLEVTG AKRVLQPPSL HTSDIKWE
001: MDLNNKIFNI LLPIVTVSFL LVFMPFSIFF KLLQFIRGCK ESEKVNGKVV IITGSSSGIG EHLAYEYARR GAYLTLVARR EDRLQVVADR CRKLGSPDVA
101: VVRGDVSVIK DCKRFVQETI SRFGRLDHLV NNAGIAEAKF FEDYSEISDV LPIVNTNFWG PVYATHFAIP HLKKTKGKII AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELHPEVG VTIVFPGLIE NGNTNPDLLA EKQDWSQVVT IESAAECAKA VVNGICRGKT FVAEPSWVRV LFWLSAICPE LLISKPKRN
101: VVRGDVSVIK DCKRFVQETI SRFGRLDHLV NNAGIAEAKF FEDYSEISDV LPIVNTNFWG PVYATHFAIP HLKKTKGKII AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELHPEVG VTIVFPGLIE NGNTNPDLLA EKQDWSQVVT IESAAECAKA VVNGICRGKT FVAEPSWVRV LFWLSAICPE LLISKPKRN
Arabidopsis Description
HSD711-beta-hydroxysteroid dehydrogenase-like 4A [Source:UniProtKB/Swiss-Prot;Acc:P0DKC7]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.