Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G285000.1 | Wheat | cytosol, golgi, peroxisome, plastid | 75.41 | 75.82 |
| TraesCS2D01G283900.1 | Wheat | plastid | 75.41 | 75.82 |
| TraesCS2B01G302100.1 | Wheat | cytosol, golgi, peroxisome, plastid | 73.24 | 73.64 |
| Os04t0390700-01 | Rice | plastid | 66.49 | 66.85 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 41.62 | 41.96 |
| HORVU5Hr1G013510.1 | Barley | golgi | 36.76 | 33.58 |
| HORVU5Hr1G120110.2 | Barley | endoplasmic reticulum, vacuole | 32.97 | 32.36 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 20.81 | 19.79 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G070310.3 | EnsemblPlantsGene:HORVU2Hr1G070310 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF29 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SMART:SM00822 |
| SUPFAM:SSF51735 | UniParc:UPI000294D6FC | UniProt:M0XTM6 | MapMan:5.9.4 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:496635122..496637419
Molecular Weight (calculated)
39530.4 Da
IEP (calculated)
8.443
GRAVY (calculated)
0.022
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMLSMLKVG YTVLRSDTPA TDLVNTFMDW AARRSLLLLA LFVPPYHVYK LAASAAATVA PEDVAGKVVL ITGASSGVGE QIAYQYARKG ARLALVAGRE
101: GSLHEVAAKA TDLGSPDVLV VPGDVARSED CKAFVQATVE RFGRLDHLVN NAGLTSVCWF EEMPDVASFK QILDVNFWGT VHPTHAALPH LKKSRGKIFV
201: NSSAAAVLAM PRMSFCNASK AAVLSFAETL RMELGDEVGV TVATPGWIES EMTKGKHLSK GGRVEVDQDT RDVSCCTTTD NTILYKFSPF VHGACSCLIC
301: KCRLGWGCSR WCVPSGAPRP SWTPSAADGA ASRCRCGTGR CSSGGRWRRR WETSCNACST AAAPATGAAR
101: GSLHEVAAKA TDLGSPDVLV VPGDVARSED CKAFVQATVE RFGRLDHLVN NAGLTSVCWF EEMPDVASFK QILDVNFWGT VHPTHAALPH LKKSRGKIFV
201: NSSAAAVLAM PRMSFCNASK AAVLSFAETL RMELGDEVGV TVATPGWIES EMTKGKHLSK GGRVEVDQDT RDVSCCTTTD NTILYKFSPF VHGACSCLIC
301: KCRLGWGCSR WCVPSGAPRP SWTPSAADGA ASRCRCGTGR CSSGGRWRRR WETSCNACST AAAPATGAAR
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGEEFLDLR SVRAIVVGFD SSKVLCDRNS LFSVLRKLWV
301: SPLFLQILFP TKVANESYDG G
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGEEFLDLR SVRAIVVGFD SSKVLCDRNS LFSVLRKLWV
301: SPLFLQILFP TKVANESYDG G
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.