Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G061600.1 | Wheat | golgi, vacuole | 96.58 | 96.86 |
| TraesCS5A01G054900.1 | Wheat | golgi, vacuole | 92.59 | 96.44 |
| Os11t0499600-01 | Rice | endoplasmic reticulum, golgi | 84.9 | 84.18 |
| EES08518 | Sorghum | golgi, vacuole | 84.33 | 83.15 |
| HORVU5Hr1G013510.1 | Barley | golgi | 94.87 | 82.22 |
| Zm00001d007345_P001 | Maize | golgi, vacuole | 82.91 | 81.06 |
| Zm00001d049161_P001 | Maize | golgi, vacuole | 81.2 | 79.83 |
| GSMUA_Achr6P12220_001 | Banana | endoplasmic reticulum, plasma membrane | 58.69 | 58.19 |
| TraesCS5D01G565600.1 | Wheat | extracellular, plasma membrane | 43.3 | 43.55 |
| TraesCS2D01G283900.1 | Wheat | plastid | 43.59 | 41.58 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 41.03 | 41.03 |
| TraesCS5D01G529200.1 | Wheat | endoplasmic reticulum, vacuole | 35.9 | 32.56 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 19.94 | 21.41 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G066100.1 | EnsemblPlantsGene:TraesCS5D01G066100 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF20 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SUPFAM:SSF51735 |
| TMHMM:TMhelix | MapMan:5.9.4 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:61642797..61646989
Molecular Weight (calculated)
38283.5 Da
IEP (calculated)
9.213
GRAVY (calculated)
0.193
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MARQTLTNGF LSGFMHVGLA LVLLAYLPIA FLCRLVYRLL IRPFAAGEDL RGKVVLITGA SSGIGENLAY EYARKGACVA LVARTEIALR AVAKTARELG
101: APDTLVVPAD ITNVDEAKRA VEETVAHFGK LNHLVANAGV WSSCFFEEIT NVSAFQNVMD LNFWGAVYPT YFALPYLKAS RGNIVVTASV AGRVPVARMS
201: FYNASKAAVI RFYETLRAEV GPHVRVTILM PGYVVSNLTM GKGVQKDGNV GFDEEARDIN VGPLPVGKTE TLAEVVVASV RRGDHYVTWP GWYWPFHMVM
301: CAAPELVDCF SRAFYVSKSS DKDGDALSKK ILMAVGGNKF YPKNIRSPQS Q
101: APDTLVVPAD ITNVDEAKRA VEETVAHFGK LNHLVANAGV WSSCFFEEIT NVSAFQNVMD LNFWGAVYPT YFALPYLKAS RGNIVVTASV AGRVPVARMS
201: FYNASKAAVI RFYETLRAEV GPHVRVTILM PGYVVSNLTM GKGVQKDGNV GFDEEARDIN VGPLPVGKTE TLAEVVVASV RRGDHYVTWP GWYWPFHMVM
301: CAAPELVDCF SRAFYVSKSS DKDGDALSKK ILMAVGGNKF YPKNIRSPQS Q
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.