Factsheet for GSMUA_Achr6P12220_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G066100.1	Wheat	golgi, vacuole	58.19	58.69
TraesCS5B01G061600.1	Wheat	golgi, vacuole	57.63	58.29
Os11t0499600-01	Rice	endoplasmic reticulum, golgi	58.19	58.19
TraesCS5A01G054900.1	Wheat	golgi, vacuole	55.37	58.16
EES08518	Sorghum	golgi, vacuole	58.19	57.87
Zm00001d049161_P001	Maize	golgi, vacuole	57.34	56.86
Zm00001d007345_P001	Maize	golgi, vacuole	57.06	56.27
EES05127	Sorghum	endoplasmic reticulum, golgi	54.24	53.19
Os02t0511100-00	Rice	endoplasmic reticulum, golgi	54.52	53.17
HORVU5Hr1G013510.1	Barley	golgi	57.91	50.62
Zm00001d033087_P001	Maize	cytosol	44.92	48.62
KXG38108	Sorghum	plastid	53.67	47.62
Zm00001d016580_P001	Maize	cytosol	24.29	46.99
Os02t0511400-01	Rice	endoplasmic reticulum, golgi	51.41	46.08
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	38.98	39.88
GSMUA_AchrUn_...	Banana	extracellular, golgi	39.55	39.11
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	24.58	24.17

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G12220_001
EnsemblPlants:GSMUA_Achr6P12220_001	EnsemblPlants:GSMUA_Achr6T12220_001	UniProt:M0T6C0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF20	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
TMHMM:TMhelix	UniParc:UPI000295F1A9	SEG:seg	:	:	:

Description

Putative Hydroxysteroid 11-beta-dehydrogenase 1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G12220_001]

Coordinates

chr6:-:8167991..8169462

Molecular Weight (calculated)

38865.6 Da

IEP (calculated)

9.533

GRAVY (calculated)

0.227

Length

354 amino acids

Sequence
(BLAST)

001: MELLNGSLSV VMHVFVAAFL LVYLPISLVW RLLRWALVRP FLKEDMTGKV VLITGASSGI GEQLAYEYAK RGASMALAAR RERALETVSA KARELGAPDV
101: LVIAADISNP SEANRVVQAT IGRFGQLNHL VCNAGLWCSC FFEEITSITA FTQLMDVNFW GSVYPTYYAL PFLKNTRGKI VVNASMAGRV PTPRMSLYNA
201: SKAAMIRFYE TLRSELGSDV RITIVNLGYV ASELTKGKAV QKNGEVAINQ EARDILVGPL PIGSTKKCAQ LIVGGACRGD EYISWPSWYK PFHVVMSLAP
301: EIVIWFSRCF YLGNPGNASS EPLSKRMLNV KGLKRFLYPA SVLSPGSVVD EIHA

Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)

001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

Arabidopsis Description

HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.