Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0511100-00 | Rice | endoplasmic reticulum, golgi | 68.61 | 74.66 |
| Zm00001d033087_P001 | Maize | cytosol | 59.24 | 71.56 |
| KXG38108 | Sorghum | plastid | 70.38 | 69.67 |
| Os11t0499600-01 | Rice | endoplasmic reticulum, golgi | 49.37 | 55.08 |
| GSMUA_Achr6P12220_001 | Banana | endoplasmic reticulum, plasma membrane | 46.08 | 51.41 |
| Os04t0390700-01 | Rice | plastid | 40.0 | 42.93 |
| Os12t0464400-01 | Rice | plastid | 37.72 | 42.69 |
| Os04t0390800-01 | Rice | plastid | 35.44 | 38.78 |
| Os03t0842900-01 | Rice | plastid | 31.65 | 35.21 |
| Os11t0265400-01 | Rice | plasma membrane | 20.76 | 25.0 |
Protein Annotations
| Gene3D:3.40.50.720 | EntrezGene:4329454 | MapMan:5.9.4 | EMBL:AK119471 | ProteinID:BAD23084.1 | ProteinID:BAF08849.1 |
| ProteinID:BAS78862.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os02g0511400 |
| EnsemblPlants:Os02t0511400-01 | PFAM:PF00106 | PRINTS:PR00081 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF24 | UniProt:Q6K785 |
| InterPro:SDR_fam | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI00003B0536 | RefSeq:XP_015623736.1 | SEG:seg |
Description
Glucose/ribitol dehydrogenase family protein. (Os02t0511400-01)
Coordinates
chr2:+:18296255..18310133
Molecular Weight (calculated)
42832.9 Da
IEP (calculated)
7.723
GRAVY (calculated)
0.114
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLYLMFHSV LMHVAAALVV LVYIPLSMPV KLFLWAFVKP LRKESLRGKV VLITGASSGI GEELAYQYAA QGACLALVAR RKKALEGVAA AALERGSPDV
101: LVLPADVSDA DQSRRAVEET VAHFGKLNHL VANAGIWSSC SFDEVTNITA FTKMMDVNFW GSVYPTYYAL PHLKASKGKL VVSCSAAGTV GTSRMSFYNA
201: TKAAQLRFYE TLRAELGSEV GITVLTPGYV ESEITKGKGI QSGGDVAVNE EARDEQIGVF PVGRVAELGE VAMDGIRAGD WYVTWPSLFR PLQLVACLAP
301: GVLDWACRAL YGTRKGARPP LGKRIMEATG MKRLFPEALR RNPAIKTEDE EYCDGEEGYG AADDAAAAYL LQCRKGLRAA HTYIRCIFSL SDSIL
101: LVLPADVSDA DQSRRAVEET VAHFGKLNHL VANAGIWSSC SFDEVTNITA FTKMMDVNFW GSVYPTYYAL PHLKASKGKL VVSCSAAGTV GTSRMSFYNA
201: TKAAQLRFYE TLRAELGSEV GITVLTPGYV ESEITKGKGI QSGGDVAVNE EARDEQIGVF PVGRVAELGE VAMDGIRAGD WYVTWPSLFR PLQLVACLAP
301: GVLDWACRAL YGTRKGARPP LGKRIMEATG MKRLFPEALR RNPAIKTEDE EYCDGEEGYG AADDAAAAYL LQCRKGLRAA HTYIRCIFSL SDSIL
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.