Factsheet for Os03t0842900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37163	Sorghum	endoplasmic reticulum	80.28	74.8
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	75.77	71.35
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	76.62	70.28
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	76.9	70.18
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	76.34	70.03
Zm00001d034801_P001	Maize	peroxisome	49.58	67.95
GSMUA_AchrUn_...	Banana	extracellular, golgi	64.23	63.69
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	61.97	63.58
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	61.41	61.58
Solyc06g064650.2.1	Tomato	endoplasmic reticulum	55.77	61.49
KRH77685	Soybean	endoplasmic reticulum	58.87	58.87
KRH27806	Soybean	nucleus	58.03	55.98
AT4G10020.1	Thale cress	endoplasmic reticulum	58.87	53.73
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	58.03	46.09
CDX90742	Canola	cytosol	57.75	45.45
CDY05081	Canola	cytosol	58.03	45.18
Os12t0464400-01	Rice	plastid	37.18	37.82
Os04t0390700-01	Rice	plastid	37.18	35.87
Os02t0511100-00	Rice	endoplasmic reticulum, golgi	36.06	35.26
Os11t0499600-01	Rice	endoplasmic reticulum, golgi	34.93	35.03
Os04t0390800-01	Rice	plastid	34.65	34.07
Os02t0511400-01	Rice	endoplasmic reticulum, golgi	35.21	31.65
Os11t0265400-01	Rice	plasma membrane	21.41	23.17

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4334744	MapMan:5.9.4	ProteinID:AAS07346.1	ProteinID:AAT77030.1	ProteinID:ABF99827.1
ProteinID:BAF13773.1	ProteinID:BAS87311.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os03g0842900	EnsemblPlants:Os03t0842900-01	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391
PANTHER:PTHR43391:SF14	UniProt:Q75LE3	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix
UniParc:UPI0000239478	RefSeq:XP_015629697.1	SEG:seg	:	:	:

Description

endosperm-specific gene 59Similar to Steroleosin-B. (Os03t0842900-01)

Coordinates

chr3:-:35428647..35430487

Molecular Weight (calculated)

39143.2 Da

IEP (calculated)

6.651

GRAVY (calculated)

0.083

Length

355 amino acids

Sequence
(BLAST)

001: MEQVVNAVLD LVVPPASMVM LAFAWPTLSF LRGVEWVVKT LTVENMHNKV VLITGASSAI GEQIAYEYAR RNANLVLVAR REHRLFAVRE NARALGAGQV
101: LVIAADVVKE DDCRRLVGDT ISFFGQLNHL VNTVSLGHDF CFEEAGDTVA FPHLMDVNFW GNVYPTYAAL PYLRRSHGRV VVNAAVEIWL PMPRMTLYSA
201: AKAAVIDFYE SLRYEVGDEV GISVATHGWI GGEASGGKFM LEEGAEMQWK GEEREVPLAG GQVEAYARMV VAGACRGDAH VKHPNWYDVF LVFRAFAPDV
301: LAWTFRLLLS TPSPSPPASA RRHQLAALPA PPLHPLLEYP SARSPGRAAQ QHKLE

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.