CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034801_P001	Maize	peroxisome	56.43	83.01
Os03t0842900-01	Rice	plastid	74.8	80.28
HORVU5Hr1G120110.2	Barley	endoplasmic reticulum, vacuole	72.44	73.21
TraesCS5D01G529200.1	Wheat	endoplasmic reticulum, vacuole	72.97	71.83
TraesCS4A01G343700.1	Wheat	endoplasmic reticulum, vacuole	72.97	71.47
TraesCS5B01G530500.1	Wheat	endoplasmic reticulum	71.92	70.8
Solyc06g064650.2.1	Tomato	endoplasmic reticulum	54.07	63.98
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	57.74	63.58
GSMUA_AchrUn_...	Banana	extracellular, golgi	59.32	63.13
VIT_18s0001g06750.t01	Wine grape	endoplasmic reticulum	58.27	62.71
KRH77685	Soybean	endoplasmic reticulum	55.38	59.44
KRH27806	Soybean	nucleus	54.33	56.25
AT4G10020.1	Thale cress	endoplasmic reticulum	56.69	55.53
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	55.91	47.65
CDX90742	Canola	cytosol	55.91	47.23
CDY05081	Canola	cytosol	55.91	46.71
EER99787	Sorghum	endoplasmic reticulum	35.96	39.37
EES05127	Sorghum	endoplasmic reticulum, golgi	36.75	38.78
OQU81408	Sorghum	extracellular, golgi, vacuole	34.38	37.32
EES08518	Sorghum	golgi, vacuole	34.38	36.8
KXG38108	Sorghum	plastid	34.12	32.58
KXG28278	Sorghum	endoplasmic reticulum	18.64	21.45

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	UniProt:A0A1B6QGW1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG37163	ProteinID:KXG37163	ProteinID:KXG37163.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF14
InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3001G017500	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0003C6A23C	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:1495068..1497208

Molecular Weight (calculated)

41565.7 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.002

Length

381 amino acids

Sequence
(BLAST)

001: MDQLVNAVMD LVVPPASMVM LAFAWPTLSF LRGVEWALKT LTKEDMLGKV VVITGASSAI GEQIAYEYAR RNANLVLVAR REQRLFGIRD NARQLGAGQV
101: LVIAADVVKE EDCRRLVADT VSYFGQLNHL VNTVSLSHDF SFEEAGDTTA FPHLMDINFW GNVYPTYAAL PYLRRSHGRV VVNASVESWL PMPRMSLYSA
201: AKAAVVDFYE TLRYEVKDEV GVTVATHGWV GGDAGGGKFT LDHHHQEGAA EVQQWKQEER EAAAAAALPG GAHVEAYARA LVAGACRGDA YVKRPSWYDV
301: FLVFRVFAPD VLAWTFRLLL SSSTPVAAAA AGPTTTTTTS AITARRPPPA ALPAPPVRPL LEYTPPPPAS RRPSSQMQKL E

Best Arabidopsis Sequence Match ( AT4G10020.1 )
(BLAST)

001: MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH
101: VIIIAADVIK EDDCRRFITQ AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR IVVNASVENW LPLPRMSLYS
201: AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301: LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY TASPPRYPAS PPRYPASPPR FSQFNIQEL

Arabidopsis Description

HSD511-beta-hydroxysteroid dehydrogenase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.