CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	93.05	86.27
TraesCS4D01G081900.1	Wheat	vacuole	82.78	83.79
TraesCS4B01G084000.1	Wheat	vacuole	81.87	82.87
Os11t0265400-01	Rice	plasma membrane	81.87	82.62
TraesCS4A01G232000.1	Wheat	vacuole	81.27	82.26
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	67.37	70.13
CDX75819	Canola	cytosol, nucleus, plasma membrane	13.29	66.67
GSMUA_Achr6P21340_001	Banana	endoplasmic reticulum, vacuole	72.51	66.67
AT3G03330.1	Thale cress	golgi	65.26	65.85
KRH00954	Soybean	endoplasmic reticulum	62.84	65.2
CDY43128	Canola	extracellular, golgi, vacuole	64.35	64.94
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	62.24	64.78
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	63.75	64.33
CDY50699	Canola	extracellular, golgi, vacuole	63.75	64.33
HORVU4Hr1G014360.2	Barley	mitochondrion	74.02	62.98
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	35.05	61.38
KRH40271	Soybean	vacuole	56.19	59.24
CDY50698	Canola	vacuole	54.98	57.96
CDY43129	Canola	extracellular, golgi, vacuole	56.5	45.83
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	46.83	43.3
AT3G03350.2	Thale cress	vacuole	31.12	27.54
EER99787	Sorghum	endoplasmic reticulum	26.89	25.57
OQU81408	Sorghum	extracellular, golgi, vacuole	23.87	22.51
EES05127	Sorghum	endoplasmic reticulum, golgi	22.96	21.05
EES08518	Sorghum	golgi, vacuole	21.75	20.22
KXG38108	Sorghum	plastid	22.66	18.8
KXG37163	Sorghum	endoplasmic reticulum	21.45	18.64

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1B6PRH7	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG28278	ProteinID:KXG28278	ProteinID:KXG28278.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR45274	InterPro:SDR_fam
SMART:SM00822	EnsemblPlantsGene:SORBI_3005G106500	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI00022071B0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:19968400..19975810

Molecular Weight (calculated)

35943.8 Da

IEP (calculated)

9.808

GRAVY (calculated)

0.085

Length

331 amino acids

Sequence
(BLAST)

001: MLLLLLIAVL TAVAAFLLFK FATVVDGDLT LVSRGPPRRD RVDGKVVWIT GASRGIGEVL AMQFANLGAK LILSARTKDE LERVKKNILS KNPDSRVEVL
101: PMDLSAGEES LKEVVHVAES FFSNAGVDYM IHNAAFERPK RGALEESEEG LKATLNVNVF GTITLTRLLA PYMLDRGTGH FVVMSSAAGK VPAPGQAIYS
201: ASKHALNGYF ASLRSELCTK GIKVTVVCPG PIETPQSSAA ASQVQTHSAE KREKRVSVER CVELTIIAAT HGLKEAWISY QPVLTVMYLV QYMPTVGYWL
301: MDKVGAKRLD AAAKKGNTYS WNLIFGSKKS A

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.