Factsheet for GSMUA_Achr6P21340_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0265400-01	Rice	plasma membrane	68.06	74.7
TraesCS4D01G081900.1	Wheat	vacuole	67.78	74.62
TraesCS4B01G084000.1	Wheat	vacuole	67.78	74.62
TraesCS4A01G232000.1	Wheat	vacuole	67.22	74.01
KXG28278	Sorghum	endoplasmic reticulum	66.67	72.51
VIT_04s0023g00860.t01	Wine grape	endoplasmic reticulum, vacuole	61.94	70.13
KRH00954	Soybean	endoplasmic reticulum	59.72	67.4
AT3G03330.1	Thale cress	golgi	60.56	66.46
Zm00001d004616_P008	Maize	endoplasmic reticulum, golgi	65.83	66.39
CDX75819	Canola	cytosol, nucleus, plasma membrane	11.94	65.15
Solyc04g024590.2.1	Tomato	endoplasmic reticulum	57.22	64.78
CDY43128	Canola	extracellular, golgi, vacuole	58.89	64.63
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.61	64.33
CDY50699	Canola	extracellular, golgi, vacuole	58.33	64.02
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	32.5	61.9
KRH40271	Soybean	vacuole	51.67	59.24
CDY50698	Canola	vacuole	51.11	58.6
HORVU4Hr1G014360.2	Barley	mitochondrion	62.22	57.58
CDY43129	Canola	extracellular, golgi, vacuole	53.06	46.81
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	44.72	44.97
AT3G03350.2	Thale cress	vacuole	31.11	29.95
GSMUA_Achr6P12220_001	Banana	endoplasmic reticulum, plasma membrane	24.17	24.58
GSMUA_Achr7P02980_001	Banana	endoplasmic reticulum, golgi	20.83	21.68
GSMUA_AchrUn_...	Banana	extracellular, golgi	19.44	19.55

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G21340_001
EnsemblPlants:GSMUA_Achr6P21340_001	EnsemblPlants:GSMUA_Achr6T21340_001	UniProt:M0T8Y2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR45274	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
TMHMM:TMhelix	UniParc:UPI000294C801	SEG:seg	:	:	:

Description

Putative Dehydrogenase/reductase SDR family member 7 [Source:GMGC_GENE;Acc:GSMUA_Achr6G21340_001]

Coordinates

chr6:+:17098046..17105654

Molecular Weight (calculated)

39014.4 Da

IEP (calculated)

9.603

GRAVY (calculated)

0.104

Length

360 amino acids

Sequence
(BLAST)

001: MRASYLFSGF CCYPTPKLTS GVVFLGKLPT ATTMLGVVAA ALLLAGLVVF LVKFATADGD FTLTSRGAPK RDEVEGKVVW ITGASRGIGE ILANQFTNLG
101: AKVILSARNA VELERVKSEI ISKYPASRVE VLPMDLASGE ESLKESVYKA ESLFSSAGVD YMVHNAAFER PKRKALDETE EGLRATMNIN VLGTITLTRL
201: LAPYMLKRGR GHFVVVSSAA GKCPSPGQAL YSASKHALNG YFHSLRSELC QEGIKVTIVC PGPIETSKTS ETSSSGKSRS LEKRVSAERC AELIIVAATH
301: GLKEAWISYQ PVLFVMYLVQ YMPTIGYWFM DLIGANRLDA AASKRSAYSW SLLFGHKKSA

Best Arabidopsis Sequence Match ( AT3G03330.1 )
(BLAST)

001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN

Arabidopsis Description

At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.