Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G084000.1 | Wheat | vacuole | 86.28 | 86.54 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 86.28 | 86.54 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 85.37 | 85.63 |
| KXG28278 | Sorghum | endoplasmic reticulum | 82.62 | 81.87 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 81.1 | 74.51 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.77 | 68.87 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 74.7 | 68.06 |
| AT3G03330.1 | Thale cress | golgi | 67.07 | 67.07 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 13.41 | 66.67 |
| KRH00954 | Soybean | endoplasmic reticulum | 64.02 | 65.83 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 65.24 | 65.24 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 77.13 | 65.04 |
| Bra031995.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 64.94 | 64.94 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 64.63 | 64.63 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 61.89 | 63.84 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 34.76 | 60.32 |
| CDY50698 | Canola | vacuole | 56.71 | 59.24 |
| KRH40271 | Soybean | vacuole | 56.1 | 58.6 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 58.54 | 47.06 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 48.78 | 44.69 |
| AT3G03350.2 | Thale cress | vacuole | 32.32 | 28.34 |
| Os12t0464400-01 | Rice | plastid | 26.22 | 24.64 |
| Os04t0390700-01 | Rice | plastid | 25.61 | 22.83 |
| Os11t0499600-01 | Rice | endoplasmic reticulum, golgi | 23.78 | 22.03 |
| Os02t0511100-00 | Rice | endoplasmic reticulum, golgi | 24.09 | 21.76 |
| Os03t0842900-01 | Rice | plastid | 23.17 | 21.41 |
| Os02t0511400-01 | Rice | endoplasmic reticulum, golgi | 25.0 | 20.76 |
| Os04t0390800-01 | Rice | plastid | 21.95 | 19.94 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:4350245 | ProteinID:AAX96078.1 | ProteinID:ABA92498.2 | EMBL:AK102327 |
| ProteinID:BAF28022.1 | ProteinID:BAT13529.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008667 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019290 | GO:GO:0019748 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os11g0265400 | EnsemblPlants:Os11t0265400-01 | PFAM:PF00106 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR45274 | UniProt:Q53LS6 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 |
| InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00005094DC | RefSeq:XP_015617543.1 | : | : | : |
Description
Glucose/ribitol dehydrogenase family protein. (Os11t0265400-01)
Coordinates
chr11:+:9073778..9078781
Molecular Weight (calculated)
35401.1 Da
IEP (calculated)
9.884
GRAVY (calculated)
-0.013
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLPVLAPLA GATAVAFLLF KFATVDGDFT LVSRGAPRRE KVDGKVVWIT GASRGIGEVL AMQFASLGAK LILSARNKEE LERVKHNIIN KHPNSRVEVL
101: PMDLSSGEES LKEHVHEAES LFSNAGVDYM IHNAAFERPK RRALEETEQG LKATFDVNVF GTITLTRLLA PSMMDRGMGH FVVMSSAAGK VPSPGQALYS
201: ASKHALNGYF SSLRSELCTK GIKVTVVCPG PIEAPQSSGA TSSSQKPSSE KRVPVERCAE LTIVAATHGL KEAWISYQPV LGVMYLVQYM PTVGLWLMDK
301: VGAKRLDVAA KKGNAYGWNL LFGGKKSA
101: PMDLSSGEES LKEHVHEAES LFSNAGVDYM IHNAAFERPK RRALEETEQG LKATFDVNVF GTITLTRLLA PSMMDRGMGH FVVMSSAAGK VPSPGQALYS
201: ASKHALNGYF SSLRSELCTK GIKVTVVCPG PIEAPQSSGA TSSSQKPSSE KRVPVERCAE LTIVAATHGL KEAWISYQPV LGVMYLVQYM PTVGLWLMDK
301: VGAKRLDVAA KKGNAYGWNL LFGGKKSA
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Arabidopsis Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.