Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43128 | Canola | extracellular, golgi, vacuole | 84.39 | 80.79 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 83.76 | 80.18 |
| AT3G03330.1 | Thale cress | golgi | 79.3 | 75.91 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 15.29 | 72.73 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 89.49 | 68.87 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 62.74 | 61.95 |
| KRH00954 | Soybean | endoplasmic reticulum | 60.83 | 59.87 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 35.35 | 58.73 |
| Bra031996.1-P | Field mustard | endoplasmic reticulum, vacuole | 66.24 | 58.1 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 58.6 | 57.86 |
| Os11t0265400-01 | Rice | plasma membrane | 59.24 | 56.71 |
| TraesCS4B01G084000.1 | Wheat | vacuole | 58.92 | 56.57 |
| TraesCS4D01G081900.1 | Wheat | vacuole | 58.92 | 56.57 |
| TraesCS4A01G232000.1 | Wheat | vacuole | 58.28 | 55.96 |
| KXG28278 | Sorghum | endoplasmic reticulum | 57.96 | 54.98 |
| KRH40271 | Soybean | vacuole | 54.78 | 54.78 |
| GSMUA_Achr6P21340_001 | Banana | endoplasmic reticulum, vacuole | 58.6 | 51.11 |
| Zm00001d004616_P008 | Maize | endoplasmic reticulum, golgi | 56.37 | 49.58 |
| HORVU4Hr1G014360.2 | Barley | mitochondrion | 52.23 | 42.16 |
| CDX90560 | Canola | endoplasmic reticulum | 24.52 | 24.92 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 24.52 | 24.92 |
| CDX71662 | Canola | plasma membrane, vacuole | 22.61 | 23.75 |
| CDX83014 | Canola | mitochondrion | 14.65 | 22.77 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 22.29 | 22.58 |
| CDX91557 | Canola | plasma membrane | 20.38 | 22.38 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 10.83 | 21.79 |
| CDY16351 | Canola | plasma membrane | 21.34 | 21.54 |
| CDY16353 | Canola | cytosol | 23.57 | 21.2 |
| CDY34029 | Canola | cytosol | 22.93 | 21.11 |
| CDY68167 | Canola | cytosol | 23.25 | 20.92 |
| CDX94277 | Canola | mitochondrion | 6.05 | 20.43 |
| CDX83013 | Canola | endoplasmic reticulum | 8.28 | 19.85 |
| CDX83157 | Canola | cytosol | 17.83 | 18.01 |
| CDX90742 | Canola | cytosol | 21.34 | 14.86 |
| CDY05081 | Canola | cytosol | 21.34 | 14.69 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078INN2 | UniProt:A0A078INN2 | EnsemblPlants:CDY50698 | ProteinID:CDY50698 |
| ProteinID:CDY50698.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00097276001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR45274 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI0004EE3D76 | SEG:seg | : | : | : |
Description
BnaC05g47850DBnaC05g47850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INN2]
Coordinates
chrLK032932:-:50404..52496
Molecular Weight (calculated)
34060.3 Da
IEP (calculated)
9.262
GRAVY (calculated)
0.086
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLFFSLGL LLLLGLLLKF AFADGNNSLR VLNSIFVIDL VFAPVVWITG ANRGIGEALA KQFASLGAKL IFSARNEAEL FRIKSELKGK YAPEHVKVLR
101: LNLPSSEERL QNVVERAVSL FPGDGVDYLI HNAAYEGPKS NAVDASEENL EATFGVNVFG TISLTKLVTP HMLKRGGGHF VVISSAAGKV PSPGQAIYAA
201: SKHALQGYFH TLRSEFFQKG SKVTVVCPGP IETSNGTGTS TSEDKNSPEK RVSSERCAEL TIIAASHNLK EAWISHQPEL LVMYLVQYMP SLGLWLMDKV
301: GGGKRVEVAE KKVS
101: LNLPSSEERL QNVVERAVSL FPGDGVDYLI HNAAYEGPKS NAVDASEENL EATFGVNVFG TISLTKLVTP HMLKRGGGHF VVISSAAGKV PSPGQAIYAA
201: SKHALQGYFH TLRSEFFQKG SKVTVVCPGP IETSNGTGTS TSEDKNSPEK RVSSERCAEL TIIAASHNLK EAWISHQPEL LVMYLVQYMP SLGLWLMDKV
301: GGGKRVEVAE KKVS
001: MLTLLFFSLG ALLLIVLLFK FAFADGDFTL ISKKHVKREA IQGKVVWITG ASRGIGEILA KQFASLDAKL ILSARNKAEL DRVKSELKGK FAPEDVKVLP
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
101: LDLASGEESL KHVVEQAVSL FPGAGVDYLV HNAAFERPKS KASDASEETL KTTFDVNVFG TISLTKLVAP HMLKQGGGHF VVISSAAGKV PSPGQAIYSA
201: SKHALHGYFH SLRSEFCQKG IKVTVVCPGP IETWNGTGTS TSEDSKSPEK RVSSERCAEL TIIAASHNLK EAWISYQPVL LVMYLVQYMP SLGFWLMDKV
301: GGKRVEVAEK KGNTYSWDLL FGKKTKTN
Arabidopsis Description
At3g03330/T21P5_25 [Source:UniProtKB/TrEMBL;Acc:Q8L7U0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.