Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
21803444
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022523.1-P | Field mustard | endoplasmic reticulum, extracellular | 99.71 | 99.71 |
| CDY68167 | Canola | cytosol | 97.99 | 97.99 |
| CDY34029 | Canola | cytosol | 87.11 | 89.15 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 88.54 | 88.54 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 88.54 | 88.54 |
| CDX83157 | Canola | cytosol | 71.92 | 80.71 |
| Solyc06g072670.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 64.47 | 64.47 |
| PGSC0003DMT400069254 | Potato | endoplasmic reticulum, extracellular, golgi | 63.9 | 63.9 |
| PGSC0003DMT400092688 | Potato | endoplasmic reticulum | 57.31 | 60.06 |
| Solyc03g097440.2.1 | Tomato | plastid | 59.89 | 59.38 |
| PGSC0003DMT400068094 | Potato | extracellular, plasma membrane, vacuole | 57.31 | 59.17 |
| KRH59797 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 34.1 | 58.33 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 53.3 | 57.76 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 22.92 | 51.28 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 36.39 | 51.21 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 49.0 | 48.72 |
| CDX71662 | Canola | plasma membrane, vacuole | 41.55 | 48.49 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 42.69 | 48.22 |
| CDY16351 | Canola | plasma membrane | 42.69 | 47.91 |
| CDX90560 | Canola | endoplasmic reticulum | 42.41 | 47.9 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 42.41 | 47.74 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 50.14 | 47.68 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 47.56 | 47.43 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 47.28 | 47.01 |
| CDX91557 | Canola | plasma membrane | 38.4 | 46.85 |
| CDX83013 | Canola | endoplasmic reticulum | 17.48 | 46.56 |
| CDX83014 | Canola | mitochondrion | 24.93 | 43.07 |
| Os04t0390800-01 | Rice | plastid | 44.13 | 42.66 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 48.14 | 41.38 |
| CDX90742 | Canola | cytosol | 40.11 | 31.04 |
| CDY05081 | Canola | cytosol | 40.11 | 30.7 |
| CDX94277 | Canola | mitochondrion | 8.02 | 30.11 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 23.78 | 25.3 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 23.78 | 25.3 |
| CDY50698 | Canola | vacuole | 21.2 | 23.57 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 23.78 | 20.34 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 3.44 | 18.18 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:A0A078FVB8 | UniProt:A0A078FVB8 | EnsemblPlants:CDY16353 | ProteinID:CDY16353 |
| ProteinID:CDY16353.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00090882001 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 |
| InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI0004EE3258 |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g11570DBnaA02g11570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVB8]
Coordinates
chrLK032063:+:116408..118264
Molecular Weight (calculated)
39034.0 Da
IEP (calculated)
6.368
GRAVY (calculated)
0.054
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFVQSIFSTI FSENVYGKVV LITGASSGIG EQLAYEYASK GACLALTARR KNRLEEVAEI AREVGSPNVV
101: TVHADVSKPD DCRRIVDETI SHFGRLDHLV NNAGIMQISM FENIEEITRT RAVMDTNFWG AVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLNFFET LRIELGSDVH ITIVTPGYIE SELTQGKYVS GEGELVVNQD IRDVQIGAFP VTSVSGCAKG IVKGVCRKER YVTEPSWFKV TYLWKVFCPE
301: LIEWGCRLMF LSGHGTPEEN ALNKKILDIP GVRSALYPES IRTPEIKSE
101: TVHADVSKPD DCRRIVDETI SHFGRLDHLV NNAGIMQISM FENIEEITRT RAVMDTNFWG AVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLNFFET LRIELGSDVH ITIVTPGYIE SELTQGKYVS GEGELVVNQD IRDVQIGAFP VTSVSGCAKG IVKGVCRKER YVTEPSWFKV TYLWKVFCPE
301: LIEWGCRLMF LSGHGTPEEN ALNKKILDIP GVRSALYPES IRTPEIKSE
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.