Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 51.51 | 98.72 |
| Bra041076.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 98.33 | 98.33 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 87.63 | 87.63 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 87.63 | 87.63 |
| CDX83013 | Canola | endoplasmic reticulum | 22.41 | 51.15 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 40.13 | 48.39 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 49.5 | 47.9 |
| CDX90560 | Canola | endoplasmic reticulum | 49.16 | 47.57 |
| KRH59795 | Soybean | extracellular | 49.5 | 45.82 |
| CDX91557 | Canola | plasma membrane | 42.47 | 44.41 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 45.82 | 44.19 |
| CDY16351 | Canola | plasma membrane | 44.48 | 42.77 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 49.16 | 41.64 |
| CDY16353 | Canola | cytosol | 48.49 | 41.55 |
| CDY34029 | Canola | cytosol | 47.16 | 41.35 |
| CDX83014 | Canola | mitochondrion | 27.76 | 41.09 |
| CDY68167 | Canola | cytosol | 47.83 | 40.97 |
| CDX83157 | Canola | cytosol | 39.46 | 37.94 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 43.48 | 37.04 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 42.81 | 36.57 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 42.14 | 35.9 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 43.81 | 35.69 |
| Os04t0390800-01 | Rice | plastid | 42.47 | 35.18 |
| CDX94277 | Canola | mitochondrion | 10.37 | 33.33 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 44.15 | 32.51 |
| CDX90742 | Canola | cytosol | 38.13 | 25.28 |
| CDY50699 | Canola | extracellular, golgi, vacuole | 27.42 | 25.0 |
| CDY05081 | Canola | cytosol | 38.13 | 25.0 |
| CDY43128 | Canola | extracellular, golgi, vacuole | 26.76 | 24.39 |
| CDY50698 | Canola | vacuole | 23.75 | 22.61 |
| CDY43129 | Canola | extracellular, golgi, vacuole | 25.08 | 18.38 |
| CDX75819 | Canola | cytosol, nucleus, plasma membrane | 3.34 | 15.15 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:A0A078C459 | EnsemblPlants:CDX71662 | ProteinID:CDX71662 | ProteinID:CDX71662.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00152297001 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF10 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI0004EC487B |
Description
BnaC09g27030D
Coordinates
chrLK031794:-:2482645..2484162
Molecular Weight (calculated)
33264.7 Da
IEP (calculated)
9.168
GRAVY (calculated)
0.225
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MALINKILNI FLPIVTFSLL VVFMPISILF SLFGFIRNSK ESDKVSGKVV IITGSSSGIG EHLAYEYARR GAYLTLVARR EDRLRLVANR CRRLGSPDVA
101: VVRGDVSVIE DCKRFIEETI SRFGRLDHLV NNAGIAEAKF FEDYLQISDV LPIMNTNFWG PVYTTHFAIP HLKKTKGKIV AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELGPEIG VTIVFPGLVE NENTNPDLLA EKQDWSQVVA IESATECAKA VVNGICRGKT FLAEPSWVRV LFWLSILCPE LLISKPKRN
101: VVRGDVSVIE DCKRFIEETI SRFGRLDHLV NNAGIAEAKF FEDYLQISDV LPIMNTNFWG PVYTTHFAIP HLKKTKGKIV AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELGPEIG VTIVFPGLVE NENTNPDLLA EKQDWSQVVA IESATECAKA VVNGICRGKT FLAEPSWVRV LFWLSILCPE LLISKPKRN
001: MDLNNKIFNI LLPIVTVSFL LVFMPFSIFF KLLQFIRGCK ESEKVNGKVV IITGSSSGIG EHLAYEYARR GAYLTLVARR EDRLQVVADR CRKLGSPDVA
101: VVRGDVSVIK DCKRFVQETI SRFGRLDHLV NNAGIAEAKF FEDYSEISDV LPIVNTNFWG PVYATHFAIP HLKKTKGKII AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELHPEVG VTIVFPGLIE NGNTNPDLLA EKQDWSQVVT IESAAECAKA VVNGICRGKT FVAEPSWVRV LFWLSAICPE LLISKPKRN
101: VVRGDVSVIK DCKRFVQETI SRFGRLDHLV NNAGIAEAKF FEDYSEISDV LPIVNTNFWG PVYATHFAIP HLKKTKGKII AVASPAGWSG VPRMSIYAAS
201: KAAMINFYET LRIELHPEVG VTIVFPGLIE NGNTNPDLLA EKQDWSQVVT IESAAECAKA VVNGICRGKT FVAEPSWVRV LFWLSAICPE LLISKPKRN
Arabidopsis Description
HSD711-beta-hydroxysteroid dehydrogenase-like 4A [Source:UniProtKB/Swiss-Prot;Acc:P0DKC7]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.