Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074514 | Potato | endoplasmic reticulum, golgi | 92.92 | 92.92 |
| VIT_17s0000g01040.t01 | Wine grape | endoplasmic reticulum | 24.65 | 53.7 |
| Solyc06g072670.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 50.99 | 51.58 |
| KRH41112 | Soybean | endoplasmic reticulum, golgi | 54.67 | 51.19 |
| CDX83013 | Canola | endoplasmic reticulum | 18.98 | 51.15 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 35.69 | 50.81 |
| CDY16351 | Canola | plasma membrane | 44.76 | 50.8 |
| CDY05818 | Canola | endoplasmic reticulum, extracellular | 22.38 | 50.64 |
| Bra022525.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 44.48 | 50.48 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 48.73 | 50.29 |
| Solyc03g097440.2.1 | Tomato | plastid | 50.14 | 50.28 |
| KRH59794 | Soybean | extracellular, plasma membrane | 15.86 | 50.0 |
| CDX91557 | Canola | plasma membrane | 40.23 | 49.65 |
| CDX71662 | Canola | plasma membrane, vacuole | 41.64 | 49.16 |
| Bra041076.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 41.08 | 48.49 |
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 42.21 | 48.22 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 39.94 | 47.16 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 39.94 | 47.16 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 46.46 | 46.72 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 45.89 | 46.29 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 45.33 | 45.58 |
| KRH59795 | Soybean | extracellular | 41.64 | 45.51 |
| CDY21787 | Canola | endoplasmic reticulum, golgi | 39.66 | 45.16 |
| CDY09733 | Canola | endoplasmic reticulum, golgi | 39.38 | 44.98 |
| CDX90560 | Canola | endoplasmic reticulum | 39.09 | 44.66 |
| Bra012757.1-P | Field mustard | extracellular, golgi | 38.81 | 44.34 |
| Bra033794.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 35.13 | 43.97 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 45.33 | 43.6 |
| CDX83014 | Canola | mitochondrion | 24.08 | 42.08 |
| AT3G47350.2 | Thale cress | endoplasmic reticulum | 38.24 | 42.06 |
| Os04t0390800-01 | Rice | plastid | 41.08 | 40.17 |
| Solyc06g064650.2.1 | Tomato | endoplasmic reticulum | 36.54 | 40.06 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 44.76 | 38.92 |
| CDX94277 | Canola | mitochondrion | 8.22 | 31.18 |
| Solyc04g024590.2.1 | Tomato | endoplasmic reticulum | 21.53 | 23.9 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | UniProt:K4CFC6 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF10 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | EnsemblPlantsGene:Solyc07g052270.2 | EnsemblPlants:Solyc07g052270.2.1 |
| TMHMM:TMhelix | UniParc:UPI000276B655 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:-:60767984..60772346
Molecular Weight (calculated)
39577.4 Da
IEP (calculated)
7.785
GRAVY (calculated)
0.253
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFILNLVHK LLNSYLPHIA TTALIHFMPL YLFIKFLYFI FRSIFIENVA GKVVVITGAS SGIGEHLAYE YAKKGARLVL AARRHKSLEQ VADMAYWLGS
101: PHVISVHADV SKVEDCKRLI NETITNFGRL DHLVSNAAVT PLYMFEDLVD VTNAAPAMDI NFWGAVYTMH FAIPYLKETK GKIVAITSSA GYLPAARISF
201: YNASKAALIS FFETLRVELG ARIGITIVNP GLTESEMTKG KFLTTEGKLE VDQVMRDVEM SVTPILPVEK SARSIVNSAC RGDKYLMEPP WFKAFFVYVL
301: FFPEVVDWFQ HWFLIPGPGK PATESPSKIL LDVTGLQKYV YPESLLSPHI KVD
101: PHVISVHADV SKVEDCKRLI NETITNFGRL DHLVSNAAVT PLYMFEDLVD VTNAAPAMDI NFWGAVYTMH FAIPYLKETK GKIVAITSSA GYLPAARISF
201: YNASKAALIS FFETLRVELG ARIGITIVNP GLTESEMTKG KFLTTEGKLE VDQVMRDVEM SVTPILPVEK SARSIVNSAC RGDKYLMEPP WFKAFFVYVL
301: FFPEVVDWFQ HWFLIPGPGK PATESPSKIL LDVTGLQKYV YPESLLSPHI KVD
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.