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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G302200.1 Wheat plasma membrane, vacuole 68.09 96.37
HORVU2Hr1G070360.1 Barley plasma membrane 95.44 91.28
TraesCS2A01G285100.1 Wheat mitochondrion 95.73 82.76
OQU81408 Sorghum extracellular, golgi, vacuole 78.63 78.63
Zm00001d003938_P001 Maize golgi, vacuole 76.35 76.57
Os04t0390800-01 Rice plastid 69.52 67.59
PGSC0003DMT400028017 Potato cytosol 13.68 56.47
CDY16353 Canola cytosol 48.72 49.0
Bra022523.1-P Field mustard endoplasmic reticulum, extracellular 48.43 48.71
CDY68167 Canola cytosol 48.15 48.42
AT5G50700.1 Thale cress endoplasmic reticulum 47.58 47.85
AT5G50600.1 Thale cress endoplasmic reticulum 47.58 47.85
PGSC0003DMT400069254 Potato endoplasmic reticulum, extracellular, golgi 47.29 47.56
Solyc06g072670.2.1 Tomato endoplasmic reticulum, extracellular, golgi 47.01 47.28
PGSC0003DMT400092688 Potato endoplasmic reticulum 44.73 47.15
CDY34029 Canola cytosol 45.3 46.63
PGSC0003DMT400068094 Potato extracellular, plasma membrane, vacuole 44.73 46.45
Bra000626.1-P Field mustard endoplasmic reticulum, extracellular 45.01 46.33
CDY05818 Canola endoplasmic reticulum, extracellular 20.51 46.15
TraesCS5D01G565600.1 Wheat extracellular, plasma membrane 45.58 45.85
CDX83013 Canola endoplasmic reticulum 17.09 45.8
PGSC0003DMT400074514 Potato endoplasmic reticulum, golgi 45.87 45.61
KRH59794 Soybean extracellular, plasma membrane 14.53 45.54
VIT_01s0146g00070.t01 Wine grape cytosol 36.18 45.52
Solyc03g097440.2.1 Tomato plastid 45.58 45.45
TraesCS2D01G283900.1 Wheat plastid 47.58 45.38
Solyc07g052270.2.1 Tomato endoplasmic reticulum, vacuole 45.58 45.33
CDY16351 Canola plasma membrane 39.32 44.37
Bra022525.1-P Field mustard endoplasmic reticulum, plasma membrane 39.32 44.37
CDX83157 Canola cytosol 39.03 44.05
CDX91557 Canola plasma membrane 35.61 43.71
AT5G50770.1 Thale cress endoplasmic reticulum 42.45 43.57
CDX71662 Canola plasma membrane, vacuole 37.04 43.48
VIT_01s0146g00090.t01 Wine grape golgi 40.17 42.6
AT3G47360.1 Thale cress endoplasmic reticulum 37.32 42.39
Bra041076.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 35.9 42.14
CDY21787 Canola endoplasmic reticulum, golgi 37.04 41.94
AT5G50690.1 Thale cress extracellular, plasma membrane 35.61 41.81
AT5G50590.1 Thale cress extracellular, plasma membrane 35.61 41.81
KRH59795 Soybean extracellular 38.46 41.8
CDY09733 Canola endoplasmic reticulum, golgi 36.47 41.42
KRH59797 Soybean endoplasmic reticulum, extracellular, plasma membrane 23.93 41.18
CDX90560 Canola endoplasmic reticulum 36.18 41.1
TraesCS5D01G066100.1 Wheat golgi, vacuole 41.03 41.03
Bra012757.1-P Field mustard extracellular, golgi 35.9 40.78
VIT_16s0039g01600.t01 Wine grape extracellular, nucleus, peroxisome, plastid 13.39 40.17
KRH41112 Soybean endoplasmic reticulum, golgi 43.02 40.05
Bra033794.1-P Field mustard endoplasmic reticulum, plasma membrane 31.05 38.65
PGSC0003DMT400028018 Potato plastid 18.52 37.36
AT3G47350.2 Thale cress endoplasmic reticulum 33.62 36.76
CDX83014 Canola mitochondrion 20.8 36.14
CDX94277 Canola mitochondrion 9.4 35.48
TraesCS5D01G529200.1 Wheat endoplasmic reticulum, vacuole 37.32 33.85
TraesCS4D01G081900.1 Wheat vacuole 21.37 22.94
Protein Annotations
EnsemblPlants:TraesCS2D01G284000.2EnsemblPlantsGene:TraesCS2D01G284000Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CSPANTHER:PTHR43391
PANTHER:PTHR43391:SF28PFAM:PF00106PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061SEG:seg
SUPFAM:SSF51735TMHMM:TMhelixMapMan:5.9.4:::
Description
No Description!
Coordinates
chr2D:+:357978349..357979983
Molecular Weight (calculated)
39014.2 Da
IEP (calculated)
8.276
GRAVY (calculated)
0.067
Length
351 amino acids
Sequence
(BLAST)
001: MTMLMGRLAG VALELALAAL LLLFLPPYYV YRFTASFLGS VFPDNVSGKV VLITGASSGI GEHLAYEYAK RGANLALVAR REASLREVTD NASALGSPSV
101: LVLPADVSKP DDCLKFIDDT VAYFGRLDHL VNNASIWQVC KFEEVEDVSY FRTLMDINFW GHVYPTRYAI PHLKKTHGRI VGVTSNSSYI FIGRNTFYNA
201: SKAAALNFYN TLRMELGGDV RITEIVPGVV ESEITKGKML TKEGEMKVDQ DERDAILGPT PAEPVAAFAK TAVKDVCRGE RYVFEPRWYL AVYLFRVCFP
301: EILAWSSRLL TVKTLGRPAT TDTVGRQILD MPGVRWFTQT ASLRSPEIQA R
Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.