CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g01030.t01	Wine grape	endoplasmic reticulum, extracellular	8.49	65.31
KRH59794	Soybean	extracellular, plasma membrane	19.36	65.18
PGSC0003DMT400028017	Potato	cytosol	14.06	62.35
KRH59797	Soybean	endoplasmic reticulum, extracellular, plasma membrane	32.1	59.31
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	51.19	54.67
KRH59795	Soybean	extracellular	42.44	49.54
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	32.36	49.19
OQU81408	Sorghum	extracellular, golgi, vacuole	41.38	44.44
Zm00001d003938_P001	Maize	golgi, vacuole	40.85	44.0
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	40.05	43.02
HORVU2Hr1G070360.1	Barley	plasma membrane	40.58	41.69
PGSC0003DMT400028018	Potato	plastid	19.1	41.38
Os04t0390800-01	Rice	plastid	39.26	41.0
KRH77685	Soybean	endoplasmic reticulum	37.14	39.44
KRH27806	Soybean	nucleus	36.6	37.5
TraesCS2A01G285100.1	Wheat	mitochondrion	39.52	36.7
KRH00954	Soybean	endoplasmic reticulum	20.42	24.14
KRH40271	Soybean	vacuole	17.77	21.34

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	EMBL:ACUP02004750	EnsemblPlantsGene:GLYMA_08G010800	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	UniProt:I1KP60	EnsemblPlants:KRH41112	ProteinID:KRH41112	ProteinID:KRH41112.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10
InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI00023389F8	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:863252..866124

Molecular Weight (calculated)

41681.7 Da

IEP (calculated)

9.693

GRAVY (calculated)

0.176

Length

377 amino acids

Sequence
(BLAST)

001: MDLIHKFLNI VAPITTFFFL CLFLPPYWTF KFFLSIINSI FSENVAGKVV HITGASSGIG EILRFIVRSI FSENVAGKVI LITGASSGIG EHLAYEYGRR
101: GARLALVARR ENRLKEVASI AKLFGSPEVI IIPADVSSSQ DCKRFVDSTI NHFGQLDHLV NNAGVSAPGL FESTTDIRNF APAMDINFWG SAYGTYFAIP
201: HLRKSKGKII AIASCTGWLP VPRMSIYNAS KAAVISLYET LRIELGRDIG ITIVTPGLIE SEMSQGKVLF KEGKMVSDQL IRDVQASLIP IRSVTEAAKS
301: IVNSACRGDS YLTEPAWFTT TFYWKIFFPD VLEFCNRRTL ISGSSERDTV SKKLLDLSGL KKYLCPKSVR NPNLKPS

Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)

001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

Arabidopsis Description

HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.