Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g01600.t01 | Wine grape | extracellular, nucleus, peroxisome, plastid | 34.69 | 14.53 |
| PGSC0003DMT400028018 | Potato | plastid | 40.82 | 11.49 |
| VIT_17s0000g01050.t01 | Wine grape | golgi, vacuole | 61.22 | 9.32 |
| CDX91557 | Canola | plasma membrane | 51.02 | 8.74 |
| KRH41112 | Soybean | endoplasmic reticulum, golgi | 65.31 | 8.49 |
| CDY16351 | Canola | plasma membrane | 51.02 | 8.04 |
| Bra022525.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 48.98 | 7.72 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 48.98 | 7.02 |
| VIT_01s0146g00070.t01 | Wine grape | cytosol | 38.78 | 6.81 |
| VIT_18s0001g06750.t01 | Wine grape | endoplasmic reticulum | 44.9 | 6.21 |
| VIT_01s0146g00090.t01 | Wine grape | golgi | 40.82 | 6.04 |
| VIT_04s0023g00860.t01 | Wine grape | endoplasmic reticulum, vacuole | 20.41 | 3.14 |
| VIT_17s0000g01040.t01 | Wine grape | endoplasmic reticulum | 4.08 | 1.23 |
| PGSC0003DMT400028017 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_17s0000g01030 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g01030.t01 | EnsemblPlantsGene:VIT_17s0000g01030 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 | ProteinID:CBI15700 | ProteinID:CBI15700.3 | SUPFAM:SSF51735 | UniParc:UPI0001BE0F26 |
| UniProt:D7SH20 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:743825..744116
Molecular Weight (calculated)
5584.0 Da
IEP (calculated)
8.499
GRAVY (calculated)
0.516
Length
49 amino acids
Sequence
(BLAST)
(BLAST)
1: MSIYCVRNFI IISLYESLRV EFGTNIGIMI VTPGLIESEM TQGKFLRKA
001: MDSINKIINF LFPLLTLYAL LVFYPTYQRL KSAVSICRNL FSENVAGKVV VITGAASGIG EALAYEYGKR GAYLALVDIR GEPLFHVAAL AELYGSPEVL
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY
101: PLVADVSKLQ DCERFIRATV LHFGRLDHLV TNAGVAPLYF FADIEDVSKA SPAMDINFWG SVYCTFFASP YLKKFRGRIV VIASGCGYIA SPRLSFYCAS
201: KAAVIAFYET LRTEFGSDIG VTIVAPGIVD SEMSRGKFMT KDGKLVVDKE LRDVQMSVLP VESAERCAKA IMRSVCRGDR YLLEPDWIGC VILLKVFCSE
301: ATEWVARWLL IARPKFPMME ALSNKILDVA HAFNSFFSFP HY
Arabidopsis Description
HSD611-beta-hydroxysteroid dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.