Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59794 | Soybean | extracellular, plasma membrane | 41.18 | 31.25 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 57.65 | 19.76 |
| PGSC0003DMT400092688 | Potato | endoplasmic reticulum | 64.71 | 16.52 |
| PGSC0003DMT400069254 | Potato | endoplasmic reticulum, extracellular, golgi | 61.18 | 14.9 |
| KRH41112 | Soybean | endoplasmic reticulum, golgi | 62.35 | 14.06 |
| CDX91557 | Canola | plasma membrane | 47.06 | 13.99 |
| Bra022525.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 50.59 | 13.83 |
| CDY16351 | Canola | plasma membrane | 50.59 | 13.83 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 56.47 | 13.68 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 55.29 | 13.43 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 57.65 | 13.35 |
| PGSC0003DMT400074514 | Potato | endoplasmic reticulum, golgi | 55.29 | 13.31 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 54.12 | 13.11 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 51.76 | 12.87 |
| PGSC0003DMT400068094 | Potato | extracellular, plasma membrane, vacuole | 50.59 | 12.72 |
| Os04t0390800-01 | Rice | plastid | 52.94 | 12.47 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 58.82 | 12.32 |
| PGSC0003DMT400066088 | Potato | endoplasmic reticulum, extracellular | 22.35 | 10.05 |
| PGSC0003DMT400028018 | Potato | plastid | 0.0 | 0.0 |
| VIT_17s0000g01030.t01 | Wine grape | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400028017 | EnsemblPlantsGene:PGSC0003DMG401010803 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43391 |
| PANTHER:PTHR43391:SF10 | PFAM:PF00106 | PGSC:PGSC0003DMG401010803 | PRINTS:PR00081 | SUPFAM:SSF51735 | UniParc:UPI000296DAC4 |
| UniProt:M1AQJ5 | MapMan:35.1 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401010803]
Coordinates
chr5:+:15780821..15781931
Molecular Weight (calculated)
9450.7 Da
IEP (calculated)
10.371
GRAVY (calculated)
-0.140
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MKGKVVLITG ASSGIGEELA YEYARRGCSL AIVARREKKL WKVAEKAKSL GCLDVISIRA DVSNVQHCKR FVDQTVKHFG RCKQI
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMASKAALV KFFETLRVEI SPDIKITIAL PGFISTDMTT PQFKEMYGSD
201: FILSESVSRC AKAIFRGIGR GEAYVIEPSW IKWIFLIKNV CPEIVDYLLD YIFVSYLKPY FKRD
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMASKAALV KFFETLRVEI SPDIKITIAL PGFISTDMTT PQFKEMYGSD
201: FILSESVSRC AKAIFRGIGR GEAYVIEPSW IKWIFLIKNV CPEIVDYLLD YIFVSYLKPY FKRD
Arabidopsis Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.