Factsheet for PGSC0003DMT400074514

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	92.92	92.92
PGSC0003DMT400028017	Potato	cytosol	13.31	55.29
VIT_17s0000g01040.t01	Wine grape	endoplasmic reticulum	24.36	53.09
PGSC0003DMT400069254	Potato	endoplasmic reticulum, extracellular, golgi	52.12	52.72
PGSC0003DMT400068094	Potato	extracellular, plasma membrane, vacuole	49.86	52.07
PGSC0003DMT400092688	Potato	endoplasmic reticulum	47.88	50.75
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	35.41	50.4
OQU81408	Sorghum	extracellular, golgi, vacuole	47.31	47.58
Zm00001d003938_P001	Maize	golgi, vacuole	47.03	47.43
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	45.61	45.87
HORVU2Hr1G070360.1	Barley	plasma membrane	45.33	43.6
PGSC0003DMT400028018	Potato	plastid	19.83	40.23
Os04t0390800-01	Rice	plastid	40.51	39.61
TraesCS2A01G285100.1	Wheat	mitochondrion	45.04	39.16
PGSC0003DMT400066088	Potato	endoplasmic reticulum, extracellular	13.31	24.87

Protein Annotations

EntrezGene:102588345	Gene3D:3.40.50.720	MapMan:5.9.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
UniProt:M1CTT1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	EnsemblPlantsGene:PGSC0003DMG400028960	PGSC:PGSC0003DMG400028960	EnsemblPlants:PGSC0003DMT400074514
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI000296B918	RefSeq:XP_006366592.1	SEG:seg

Description

Corticosteroid 11-beta-dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400028960]

Coordinates

chr7:-:46857467..46859983

Molecular Weight (calculated)

39777.8 Da

IEP (calculated)

7.627

GRAVY (calculated)

0.269

Length

353 amino acids

Sequence
(BLAST)

001: MEFILNLIHK LLNTYLPHIA TTALIHFMPL YLFLKFLYFI FRCIFIENVA GKVVVITGAS SGIGEHLAYE YAKKGARLVL AARRRKSLEQ VADMAYWLGS
101: PRVISIHADV SKVEDCQRLI EETISNFGRL DHLVSNAAVT PLYMFEDLVE VTNAAPAMDI NFWGAVYTTH FAIPYLKETK GKIVAITSSA GYLPAARISF
201: YNASKAALIS FFETLRVELG TQIGITIVTP GLIESEMTKG KFLTTEGKLE VDQVMRDVEM SVTPILPVEK CARSIVKSAC RGDKYLTEPL WFKTFFIYVL
301: FFPEVVDWFQ HWFLIPGPGK PTTETPSKIL LDLTGLQKYV YPESLLSPHI KVD

Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)

001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD

Arabidopsis Description

HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.