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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G302200.1 Wheat plasma membrane, vacuole 59.85 97.98
TraesCS2D01G284000.2 Wheat plasma membrane, vacuole 82.76 95.73
HORVU2Hr1G070360.1 Barley plasma membrane 84.48 93.46
OQU81408 Sorghum extracellular, golgi, vacuole 67.98 78.63
Zm00001d003938_P001 Maize golgi, vacuole 66.5 77.14
Os04t0390800-01 Rice plastid 60.34 67.87
PGSC0003DMT400028017 Potato cytosol 12.32 58.82
CDY68167 Canola cytosol 41.38 48.14
CDY16353 Canola cytosol 41.38 48.14
Bra022523.1-P Field mustard endoplasmic reticulum, extracellular 41.13 47.85
AT5G50700.1 Thale cress endoplasmic reticulum 40.89 47.56
AT5G50600.1 Thale cress endoplasmic reticulum 40.89 47.56
TraesCS4A01G319700.2 Wheat extracellular, golgi 38.92 47.16
PGSC0003DMT400069254 Potato endoplasmic reticulum, extracellular, golgi 40.39 46.99
CDY05818 Canola endoplasmic reticulum, extracellular 17.98 46.79
TraesCS2A01G285000.1 Wheat cytosol, golgi, peroxisome, plastid 42.36 46.74
Solyc06g072670.2.1 Tomato endoplasmic reticulum, extracellular, golgi 40.15 46.7
CDX83013 Canola endoplasmic reticulum 15.02 46.56
CDY34029 Canola cytosol 38.92 46.33
PGSC0003DMT400092688 Potato endoplasmic reticulum 37.93 46.25
Bra000626.1-P Field mustard endoplasmic reticulum, extracellular 38.67 46.04
PGSC0003DMT400068094 Potato extracellular, plasma membrane, vacuole 37.93 45.56
VIT_01s0146g00070.t01 Wine grape cytosol 31.03 45.16
PGSC0003DMT400074514 Potato endoplasmic reticulum, golgi 39.16 45.04
Solyc07g052270.2.1 Tomato endoplasmic reticulum, vacuole 38.92 44.76
KRH59794 Soybean extracellular, plasma membrane 12.32 44.64
Solyc03g097440.2.1 Tomato plastid 38.67 44.6
CDX83157 Canola cytosol 33.99 44.37
CDX71662 Canola plasma membrane, vacuole 32.51 44.15
Bra022525.1-P Field mustard endoplasmic reticulum, plasma membrane 33.5 43.73
CDY16351 Canola plasma membrane 33.5 43.73
CDX91557 Canola plasma membrane 30.3 43.01
Bra041076.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.53 42.81
TraesCS5A01G054900.1 Wheat golgi, vacuole 35.47 42.73
AT5G50770.1 Thale cress endoplasmic reticulum 35.96 42.69
VIT_01s0146g00090.t01 Wine grape golgi 34.73 42.6
AT5G50690.1 Thale cress extracellular, plasma membrane 30.79 41.81
AT5G50590.1 Thale cress extracellular, plasma membrane 30.79 41.81
AT3G47360.1 Thale cress endoplasmic reticulum 31.77 41.75
KRH59795 Soybean extracellular 32.76 41.18
CDY21787 Canola endoplasmic reticulum, golgi 31.03 40.65
CDY09733 Canola endoplasmic reticulum, golgi 30.79 40.45
VIT_16s0039g01600.t01 Wine grape extracellular, nucleus, peroxisome, plastid 11.58 40.17
CDX90560 Canola endoplasmic reticulum 30.54 40.13
Bra012757.1-P Field mustard extracellular, golgi 30.3 39.81
KRH59797 Soybean endoplasmic reticulum, extracellular, plasma membrane 19.95 39.71
KRH41112 Soybean endoplasmic reticulum, golgi 36.7 39.52
Bra033794.1-P Field mustard endoplasmic reticulum, plasma membrane 26.6 38.3
PGSC0003DMT400028018 Potato plastid 16.01 37.36
AT3G47350.2 Thale cress endoplasmic reticulum 28.82 36.45
CDX83014 Canola mitochondrion 17.24 34.65
CDX94277 Canola mitochondrion 7.88 34.41
TraesCS4A01G343700.1 Wheat endoplasmic reticulum, vacuole 32.02 33.42
TraesCS4A01G232000.1 Wheat vacuole 17.24 21.41
Protein Annotations
EnsemblPlants:TraesCS2A01G285100.1EnsemblPlantsGene:TraesCS2A01G285100Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CSPANTHER:PTHR43391
PANTHER:PTHR43391:SF28PFAM:PF00106PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061SEG:seg
SUPFAM:SSF51735TMHMM:TMhelixMapMan:5.9.4:::
Description
No Description!
Coordinates
chr2A:+:478908118..478909905
Molecular Weight (calculated)
45280.1 Da
IEP (calculated)
9.982
GRAVY (calculated)
-0.040
Length
406 amino acids
Sequence
(BLAST)
001: MAVSMPSRLS TRLLHRTAPQ RRILPASCRH ICNAGAQVRR RRDTHCKKYL SARTPMTMLM GRLAGVALQL ALAALLVLFL PPYYVYRLTA SFLGSVFPDS
101: VSGKVVLITG ASSGIGEHLA YEYAKRGASL ALVARREASL REVADHASAL GSPSVLVLPA DVSKPDDCRK FIDDTVAYFG RLDHLVNNAS IWQVCKFQEV
201: EDVNYFRTLM DINFWGHVYP TRYAIPHLKK THGRIVGVTS NSSYIFIGRN TFYNASKAAA LNFYDTLRME LGGEVRITEI VPGVVESEIT KGKMLTKEGE
301: MKVDQDERDA ILGPTPAEPV AAFAKTAVKD VCRGQRYVFE PRWYMAVYLF RVCFPEILAW SSRLLTVKTL GRPATTDTVG RQILDMPGVR WLTQTASLRS
401: PEIQAR
Best Arabidopsis Sequence Match ( AT5G50600.1 )
(BLAST)
001: MELINDFLNL TAPFFTFFGL CFFLPPFYFF KFLQSIFSTI FSENLYGKVV LITGASSGIG EQLAYEYACR GACLALTARR KNRLEEVAEI ARELGSPNVV
101: TVHADVSKPD DCRRIVDDTI THFGRLDHLV NNAGMTQISM FENIEDITRT KAVLDTNFWG SVYTTRAALP YLRQSNGKIV AMSSSAAWLT APRMSFYNAS
201: KAALLSFFET MRIELGGDVH ITIVTPGYIE SELTQGKYFS GEGELIVNQD MRDVQVGPFP VASASGCAKS IVNGVCRKQR YVTEPSWFKV TYLWKVLCPE
301: LIEWGCRLLY MTGTGMSEDT ALNKRIMDIP GVRSTLYPES IRTPEIKSD
Arabidopsis Description
HSD111-beta-hydroxysteroid dehydrogenase 1B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC6]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.