Factsheet for Bra012757.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90560	Canola	endoplasmic reticulum	99.35	99.35
Bra033794.1-P	Field mustard	endoplasmic reticulum, plasma membrane	59.55	65.25
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	47.57	49.16
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	45.63	45.34
KRH59795	Soybean	extracellular	47.25	45.2
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	34.63	43.15
Bra022523.1-P	Field mustard	endoplasmic reticulum, extracellular	48.22	42.69
Bra000626.1-P	Field mustard	endoplasmic reticulum, extracellular	46.93	42.52
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	44.34	38.81
Zm00001d003938_P001	Maize	golgi, vacuole	42.39	37.43
OQU81408	Sorghum	extracellular, golgi, vacuole	41.1	36.18
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	40.78	35.9
HORVU2Hr1G070360.1	Barley	plasma membrane	41.42	34.88
Os04t0390800-01	Rice	plastid	35.92	30.75
TraesCS2A01G285100.1	Wheat	mitochondrion	39.81	30.3
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	39.81	27.52
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	27.83	26.22
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	21.04	18.16

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	EnsemblPlantsGene:Bra012757	EnsemblPlants:Bra012757.1	EnsemblPlants:Bra012757.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	UniProt:M4D8E7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0002540845	SEG:seg	:	:

Description

AT3G47360 (E=5e-110) AtHSD3 | AtHSD3 (hydroxysteroid dehydrogenase 3); binding / catalytic/ oxidoreductase

Coordinates

chrA03:-:22397479..22399700

Molecular Weight (calculated)

34678.7 Da

IEP (calculated)

8.744

GRAVY (calculated)

0.311

Length

309 amino acids

Sequence
(BLAST)

001: MDMLHIILNI LLPPLTIIFL FLFYPIYLFI KLLNCVRKHL CVENVAGKVV LITGASSGIG EHVAYEYAKK GADLALVARR EDRLHIVAET SRKLGSRDVI
101: IIPGDVTKIN DCMKFISETI SHFGKVDHLI NNAGVSQTVL FENFSQIQDA NPIMDTNFWG STNITYYAIP HLRKSKGKIV VIASAAAKIA IPVATIYSAS
201: KAALLGFYEA LRIELNPDIK VTIVFPGLIS TDMTTPEIIK RHGSDFMVSE PVSRCAKAIF QGVCRGEEYV ETPSWIKWFF LVKSVCPEVI NSIFNYSFLH
301: FIKPYFKRE

Best Arabidopsis Sequence Match ( AT3G47350.1 )
(BLAST)

001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGRGEAYVI EPSWIKWIFL IKNVCPEIVD YLLDYIFVSY
301: LKPYFKRD

Arabidopsis Description

ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.