Factsheet for Bra033794.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83013	Canola	endoplasmic reticulum	45.04	96.95
AT3G47360.1	Thale cress	endoplasmic reticulum	71.99	65.7
Bra012757.1-P	Field mustard	extracellular, golgi	65.25	59.55
AT3G47350.2	Thale cress	endoplasmic reticulum	66.31	58.26
TraesCS2B01G302200.1	Wheat	plasma membrane, vacuole	37.94	43.15
Bra041076.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	45.74	43.14
KRH59795	Soybean	extracellular	47.52	41.49
Bra022525.1-P	Field mustard	endoplasmic reticulum, plasma membrane	42.2	38.26
Bra022523.1-P	Field mustard	endoplasmic reticulum, extracellular	44.68	36.1
Bra000626.1-P	Field mustard	endoplasmic reticulum, extracellular	43.26	35.78
Solyc07g052270.2.1	Tomato	endoplasmic reticulum, vacuole	43.97	35.13
Zm00001d003938_P001	Maize	golgi, vacuole	41.49	33.43
OQU81408	Sorghum	extracellular, golgi, vacuole	40.78	32.76
TraesCS2D01G284000.2	Wheat	plasma membrane, vacuole	38.65	31.05
HORVU2Hr1G070360.1	Barley	plasma membrane	39.36	30.25
Os04t0390800-01	Rice	plastid	36.17	28.25
TraesCS2A01G285100.1	Wheat	mitochondrion	38.3	26.6
Bra031995.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.6	22.87
Bra000697.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	35.82	22.6
Bra031996.1-P	Field mustard	endoplasmic reticulum, vacuole	21.28	16.76

Protein Annotations

Gene3D:3.40.50.720	MapMan:5.9.4	EnsemblPlantsGene:Bra033794	EnsemblPlants:Bra033794.1	EnsemblPlants:Bra033794.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	UniProt:M4EYA2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43391	PANTHER:PTHR43391:SF10	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0002543B9E	SEG:seg	:	:

Description

AT3G47360 (E=3e-098) AtHSD3 | AtHSD3 (hydroxysteroid dehydrogenase 3); binding / catalytic/ oxidoreductase

Coordinates

chrA01:+:14159597..14168638

Molecular Weight (calculated)

31758.8 Da

IEP (calculated)

7.193

GRAVY (calculated)

0.342

Length

282 amino acids

Sequence
(BLAST)

001: MDILHTSLDV LLPLVSIIFF FFFYPFYVLI KLVMFLYKQF LFENVAGKVV LITGASSGIG EHLAYEYAKK GAYLALVARR EDRLDIVAET SRQLGSGDVI
101: IIPGDVAEVE DCKEFIDETI RHFGKLDHLI NNAGVTQTVV FEDYIHIQAA NPIMDINFWG STYITYFAIP HLRKSKGKVI VISSGAANIA LPVASVYSAS
201: KAALLRFFET LRIELNPDIK ITIVFPGVVA TDMTTPRCIE HVSNKMCTFL YRININTNSN YMYFRALDLK NSMVQILSSR SQ

Best Arabidopsis Sequence Match ( AT3G47360.1 )
(BLAST)

001: MDILTTILNL LLPPLTIIFL FLFYPFYLLI KLVLCLRKNL HFENVARKVV LITGASSGIG EHVAYEYAKK GAYLALVARR RDRLEIVAET SRQLGSGNVI
101: IIPGDVSNVE DCKKFIDETI RHFGKLDHLI NNAGVFQTVL FEDFTQIQDA NPIMDINFWG TTYITYFAIP HLRKSKGKIV AITSGSANIP LPLASIYAAS
201: KAALLRFFET LRIELSPDIK ITIVLPGVVS TDMTTPHCIE KYGSDFILSE SVSKCAKAIF RGIGRGETYI EEPSWMKWLF IMKNVCPEIV DYGLNYLFVS
301: YLKPYFKRD

Arabidopsis Description

HSD311-beta-hydroxysteroid dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STY7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.