Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G47360.1 | Thale cress | endoplasmic reticulum | 71.96 | 74.76 |
| Bra033794.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 58.26 | 66.31 |
| CDX83014 | Canola | mitochondrion | 35.51 | 56.44 |
| AT5G50590.1 | Thale cress | extracellular, plasma membrane | 42.37 | 45.48 |
| AT5G50690.1 | Thale cress | extracellular, plasma membrane | 42.37 | 45.48 |
| KRH59795 | Soybean | extracellular | 44.55 | 44.27 |
| TraesCS2B01G302200.1 | Wheat | plasma membrane, vacuole | 33.33 | 43.15 |
| AT5G50770.1 | Thale cress | endoplasmic reticulum | 41.43 | 38.89 |
| Solyc07g052270.2.1 | Tomato | endoplasmic reticulum, vacuole | 42.06 | 38.24 |
| AT5G50600.1 | Thale cress | endoplasmic reticulum | 41.12 | 37.82 |
| AT5G50700.1 | Thale cress | endoplasmic reticulum | 41.12 | 37.82 |
| Zm00001d003938_P001 | Maize | golgi, vacuole | 38.01 | 34.86 |
| OQU81408 | Sorghum | extracellular, golgi, vacuole | 37.07 | 33.9 |
| TraesCS2D01G284000.2 | Wheat | plasma membrane, vacuole | 36.76 | 33.62 |
| HORVU2Hr1G070360.1 | Barley | plasma membrane | 37.38 | 32.7 |
| Os04t0390800-01 | Rice | plastid | 34.27 | 30.47 |
| AT4G10020.1 | Thale cress | endoplasmic reticulum | 35.2 | 29.05 |
| TraesCS2A01G285100.1 | Wheat | mitochondrion | 36.45 | 28.82 |
| AT3G03330.1 | Thale cress | golgi | 26.17 | 25.61 |
| AT3G03350.2 | Thale cress | vacuole | 17.76 | 15.24 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:5.9.4 | EntrezGene:823889 | ProteinID:AEE78269.1 | ArrayExpress:AT3G47350 | EnsemblPlantsGene:AT3G47350 |
| RefSeq:AT3G47350 | TAIR:AT3G47350 | RefSeq:AT3G47350-TAIR-G | EnsemblPlants:AT3G47350.2 | TAIR:AT3G47350.2 | Symbol:ATHSD2 |
| UniProt:F4JBH8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001154667.1 |
| PFAM:PF00106 | PO:PO:0000293 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR43391 | PANTHER:PTHR43391:SF10 |
| InterPro:SDR_fam | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0001A7B2C0 | : | : |
Description
ATHSD2Hydroxysteroid dehydrogenase 2 [Source:UniProtKB/TrEMBL;Acc:F4JBH8]
Coordinates
chr3:+:17446818..17449703
Molecular Weight (calculated)
35717.6 Da
IEP (calculated)
7.994
GRAVY (calculated)
0.282
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMLHTILNF LLPPLTISFL VLFYPFYLFT KLMSCLKHLH FENVTGKVVL ITGASSGIGE HVAYEYAKKG AKLALVARRK DRLEIVAETS RQLGSGDVII
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGEEFLDLR SVRAIVVGFD SSKVLCDRNS LFSVLRKLWV
301: SPLFLQILFP TKVANESYDG G
101: IPGDVSNVED CKKFIDETIH HFGKLDHLIN NAGVPQTVIF EDFTQIQDAN SIMDINFWGS TYITYFAIPH LRKSKGKIVV ISSATAIIPL QAASVYSASK
201: AALVKFFETL RVEISPDIKI TIALPGFIST DMTTPQFKEM YGSDFILSES VSRCAKAIFR GIGEEFLDLR SVRAIVVGFD SSKVLCDRNS LFSVLRKLWV
301: SPLFLQILFP TKVANESYDG G
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.